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tools for phase3 validation#1526

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RussTreadon-NOAA merged 17 commits into
developfrom
feature/phase3_validation
Mar 7, 2025
Merged

tools for phase3 validation#1526
RussTreadon-NOAA merged 17 commits into
developfrom
feature/phase3_validation

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@RussTreadon-NOAA
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Description

The PR adds python script setup_phase3.py to ush/ufoeval along with two configuration yamls and one README. Users edit the yamls to configure a GSI or JEDI based atmospheric DA stand-alone job. Script setup_phase3.py reads the specified configuration yaml, stages files in the run directory, and creates a run script.

Companion PRs

None

Issues

Resolves #1487

Automated CI tests to run in Global Workflow

This PR adds four files: 2 config files, 1 python script, and one README. None of these changes impact workflow related tests. Therefore, none of the g-w tests will be checked for this PR.

  • atm_jjob
  • C96C48_ufs_hybatmDA
  • C96C48_hybatmaerosnowDA
  • C48mx500_3DVarAOWCDA
  • C48mx500_hybAOWCDA
  • C96C48_hybatmDA

@RussTreadon-NOAA RussTreadon-NOAA self-assigned this Mar 6, 2025
@RussTreadon-NOAA RussTreadon-NOAA added the hera-GW-RT Queue for automated testing with global-workflow on Hera label Mar 6, 2025
@emcbot emcbot added hera-GW-RT-Running Automated testing with global-workflow running on Hera and removed hera-GW-RT Queue for automated testing with global-workflow on Hera labels Mar 6, 2025
@RussTreadon-NOAA RussTreadon-NOAA changed the title Feature/phase3 validation tools for phase3 validation Mar 6, 2025
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emcbot commented Mar 6, 2025

Automated GW-GDASApp Testing Results:
Machine: hera

Start: Thu Mar  6 21:11:52 UTC 2025 on hfe03
---------------------------------------------------
Build:                                 *SUCCESS*
Build: Completed at Thu Mar  6 22:01:37 UTC 2025
---------------------------------------------------
Tests: ctest -j12 -R gdasapp -E atm_jjob|C96C48_ufs_hybatmDA|C96C48_hybatmaerosnowDA|C48mx500_3DVarAOWCDA|C48mx500_hybAOWCDA|C96C48_hybatmDA
Tests:                                 *SUCCESS*
Tests: Completed at Thu Mar  6 22:02:51 UTC 2025
Tests: 100% tests passed, 0 tests failed out of 33

@emcbot emcbot added hera-GW-RT-Passed Automated testing with global-workflow successful on Hera and removed hera-GW-RT-Running Automated testing with global-workflow running on Hera labels Mar 6, 2025
Comment thread ush/ufoeval/README_phase3 Outdated
Comment thread ush/ufoeval/README_phase3 Outdated
Comment thread ush/ufoeval/setup_phase3.py Outdated
Comment thread ush/ufoeval/setup_phase3.py Outdated
Comment thread ush/ufoeval/setup_phase3.py Outdated
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Looks good, no objections

@RussTreadon-NOAA
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Thank you @CoryMartin-NOAA and @DavidNew-NOAA for your comments & reviews. Merging into develop.

@RussTreadon-NOAA RussTreadon-NOAA merged commit 58855f9 into develop Mar 7, 2025
@RussTreadon-NOAA RussTreadon-NOAA deleted the feature/phase3_validation branch March 7, 2025 16:22
@RussTreadon-NOAA RussTreadon-NOAA restored the feature/phase3_validation branch March 17, 2025 18:43
jspsl pushed a commit that referenced this pull request Mar 26, 2025
danholdaway added a commit that referenced this pull request Mar 26, 2025
* develop:
  added original date (#1570)
  Update OCEAN_BASIN_FILE_ORION path for marine ctest (#1569)
  Fixing window_begin and end in yaml for redating ADT (#1565)
  Save LETKF mean analysis and mean increment for verification (#1566)
  Update JEDI hashes (20250324) (#1567)
  Removes obsolete json files from marine bufr2ioda (#1564)
  Add hybrid 4denvar as a phase3 validation configuration (#1552)
  Bugfix/ocn ecen (#1550)
  Bugfix SSS obs for LETKF (#1560)
  Bugfix ocean ensemble recentering (#1558)
  apply ci path patch only when running g-w ctests (#1554)
  Update JEDI hashes (20250317)  (#1531)
  add option to create_experiment.py in create_exp.sh  (#1546)
  Update jcb hashes and support initial IODA stats capability (#1547)
  Fix GW-CI CTest dependencies (#1534)
  Converts prepoceanobs to use JCB-style obs list and config files (#1527)
  JEDI-based ensemble recentering and analysis calculation (#1488)
  tools for phase3 validation (#1526)
  Update JEDI hashes (20250306) (#1520)
  New jcb-gdas # and insitu obs prep bug fix  (#1523)
  Marine in situ obs update (SSS, moorings, drifters) (#1511)
  Save marine background and analysis spread (#1517)
  Minor build and install updates and ctest cleanup (#1512)
  correct logic for upper loop limit in chem_diagb (#1516)
  Incorporate multi-cycle concatination and separation of variables in post-BUFR observations (#1504)
  Update JEDI hashes (20250225) (#1475)
  Add a depth dependent e-fold scale (#1494)
  Update jcb and da-utils hashes to support land DA. (#1509)
  Add options to inflate the ensemble while recentering (#1501)
  Add components to use jcb yamls for marine letkf job (#1486)
  Add GNSSRO bufr2ioda and json files (#1448)
  Removal of the marine verification tools (#1499)
  update logic to identify MSU machine (#1498)
  IODA Converter with In-Situ Observations Concatenation and ObsError Inflation (#1472)
  Add sea ice recentering (#1478)
  marine vrfy bugfix (#1483)
  add LD_LIBRARY_PATH patch for wcoss2 build (#1484)
  Bugfix for ensemble recenter + add a test (#1477)
  Add code changes for the implementation of the  low-resolution B (#1441)
  update spack-stack path in Hera modulefiles (#1471)
  fixed glider output filename (#1469)
  add gdas_waveinit to C48mx500_3DVarAOWCDA ctest suite (#1470)
  update jcb-gdas hash 20250128 (#1466)
  Time series of omb stats and html doc (#1463)
  Update marine vrfy HTML codes (#1464)
  Automate the verify tools to submit from start pdy to end pdy (#1458)
  Update an offline marine vrfy tool (#1447)
  Update JEDI hashes (20250127) (#1460)
DavidNew-NOAA pushed a commit that referenced this pull request Jan 16, 2026
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Create tools for phase3 validation

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