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add LD_LIBRARY_PATH patch for wcoss2 build#1484

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RussTreadon-NOAA merged 1 commit into
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hotfix/wcoss2_build
Feb 7, 2025
Merged

add LD_LIBRARY_PATH patch for wcoss2 build#1484
RussTreadon-NOAA merged 1 commit into
developfrom
hotfix/wcoss2_build

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@RussTreadon-NOAA
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Description

This PR fixes a problem with the GDASApp build on WCOSS2 following implementation of RFC 13644.

Companion PRs

None

Issues

Resolves #1482

Automated CI tests to run in Global Workflow

  • atm_jjob
  • C96C48_ufs_hybatmDA
  • C96C48_hybatmaerosnowDA
  • C48mx500_3DVarAOWCDA
  • C48mx500_hybAOWCDA
  • C96C48_hybatmDA

@RussTreadon-NOAA RussTreadon-NOAA self-assigned this Feb 7, 2025
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@CoryMartin-NOAA , @guillaumevernieres , @DavidNew-NOAA , @danholdaway

We need to specify

export LD_LIBRARY_PATH="${LD_LIBRARY_PATH}:/opt/cray/pe/mpich/8.1.19/ofi/intel/19.0/lib"

when building GDASApp on WCOSS2.

This PR adds LD_LIBRARY_PATH to build.sh.

An alternative solution is to set LD_LIBRARY_PATH in g-w sorc/build_gdas.sh.

Since this is a GDASApp build issue on WCOSS2 my preference is to make the change in build.sh.

If you feel it's better to make the change in g-w sorc/build_gdas.sh, I can close this PR and we can add this change to one of our JEDI g-w PRs (#3238 or #3309).

@CoryMartin-NOAA
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no it should be here in the event of a standalone build

@RussTreadon-NOAA
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Good point, @CoryMartin-NOAA . 99.9% of my work is workflow-centric. Our developers often work in GDASApp without g-w.

@RussTreadon-NOAA RussTreadon-NOAA merged commit 07ff8a0 into develop Feb 7, 2025
@RussTreadon-NOAA RussTreadon-NOAA deleted the hotfix/wcoss2_build branch February 7, 2025 17:10
danholdaway added a commit that referenced this pull request Mar 26, 2025
* develop:
  added original date (#1570)
  Update OCEAN_BASIN_FILE_ORION path for marine ctest (#1569)
  Fixing window_begin and end in yaml for redating ADT (#1565)
  Save LETKF mean analysis and mean increment for verification (#1566)
  Update JEDI hashes (20250324) (#1567)
  Removes obsolete json files from marine bufr2ioda (#1564)
  Add hybrid 4denvar as a phase3 validation configuration (#1552)
  Bugfix/ocn ecen (#1550)
  Bugfix SSS obs for LETKF (#1560)
  Bugfix ocean ensemble recentering (#1558)
  apply ci path patch only when running g-w ctests (#1554)
  Update JEDI hashes (20250317)  (#1531)
  add option to create_experiment.py in create_exp.sh  (#1546)
  Update jcb hashes and support initial IODA stats capability (#1547)
  Fix GW-CI CTest dependencies (#1534)
  Converts prepoceanobs to use JCB-style obs list and config files (#1527)
  JEDI-based ensemble recentering and analysis calculation (#1488)
  tools for phase3 validation (#1526)
  Update JEDI hashes (20250306) (#1520)
  New jcb-gdas # and insitu obs prep bug fix  (#1523)
  Marine in situ obs update (SSS, moorings, drifters) (#1511)
  Save marine background and analysis spread (#1517)
  Minor build and install updates and ctest cleanup (#1512)
  correct logic for upper loop limit in chem_diagb (#1516)
  Incorporate multi-cycle concatination and separation of variables in post-BUFR observations (#1504)
  Update JEDI hashes (20250225) (#1475)
  Add a depth dependent e-fold scale (#1494)
  Update jcb and da-utils hashes to support land DA. (#1509)
  Add options to inflate the ensemble while recentering (#1501)
  Add components to use jcb yamls for marine letkf job (#1486)
  Add GNSSRO bufr2ioda and json files (#1448)
  Removal of the marine verification tools (#1499)
  update logic to identify MSU machine (#1498)
  IODA Converter with In-Situ Observations Concatenation and ObsError Inflation (#1472)
  Add sea ice recentering (#1478)
  marine vrfy bugfix (#1483)
  add LD_LIBRARY_PATH patch for wcoss2 build (#1484)
  Bugfix for ensemble recenter + add a test (#1477)
  Add code changes for the implementation of the  low-resolution B (#1441)
  update spack-stack path in Hera modulefiles (#1471)
  fixed glider output filename (#1469)
  add gdas_waveinit to C48mx500_3DVarAOWCDA ctest suite (#1470)
  update jcb-gdas hash 20250128 (#1466)
  Time series of omb stats and html doc (#1463)
  Update marine vrfy HTML codes (#1464)
  Automate the verify tools to submit from start pdy to end pdy (#1458)
  Update an offline marine vrfy tool (#1447)
  Update JEDI hashes (20250127) (#1460)
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HOTFIX: WCOSS2 build issue

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