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New jcb-gdas # and insitu obs prep bug fix #1523

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RussTreadon-NOAA merged 1 commit into
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bugfix/prepinsitu
Mar 5, 2025
Merged

New jcb-gdas # and insitu obs prep bug fix #1523
RussTreadon-NOAA merged 1 commit into
developfrom
bugfix/prepinsitu

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@guillaumevernieres
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@guillaumevernieres guillaumevernieres commented Mar 5, 2025

Description

Issues

Automated CI tests to run in Global Workflow

  • atm_jjob
  • C96C48_ufs_hybatmDA
  • C96C48_hybatmaerosnowDA
  • C48mx500_3DVarAOWCDA
  • C48mx500_hybAOWCDA
  • C96C48_hybatmDA

@guillaumevernieres guillaumevernieres self-assigned this Mar 5, 2025
@guillaumevernieres guillaumevernieres added hera-GW-RT Queue for automated testing with global-workflow on Hera hercules-GW-RT Queue for automated testing with global-workflow on Hercules labels Mar 5, 2025
@emcbot emcbot added hercules-GW-RT-Running Automated testing with global-workflow running on Hercules hera-GW-RT-Running Automated testing with global-workflow running on Hera and removed hercules-GW-RT Queue for automated testing with global-workflow on Hercules hera-GW-RT Queue for automated testing with global-workflow on Hera labels Mar 5, 2025
@emcbot
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emcbot commented Mar 5, 2025

Automated GW-GDASApp Testing Results:
Machine: hera

Start: Wed Mar  5 17:55:56 UTC 2025 on hfe02
---------------------------------------------------
Build:                                 *SUCCESS*
Build: Completed at Wed Mar  5 18:38:45 UTC 2025
---------------------------------------------------
Tests: ctest -j12 -R gdasapp -E atm_jjob|C96C48_ufs_hybatmDA|C96C48_hybatmaerosnowDA|C48mx500_3DVarAOWCDA|C48mx500_hybAOWCDA|C96C48_hybatmDA
Tests:                                 *SUCCESS*
Tests: Completed at Wed Mar  5 18:39:18 UTC 2025
Tests: 100% tests passed, 0 tests failed out of 33

@emcbot emcbot added hera-GW-RT-Passed Automated testing with global-workflow successful on Hera and removed hera-GW-RT-Running Automated testing with global-workflow running on Hera labels Mar 5, 2025
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emcbot commented Mar 5, 2025

Automated GW-GDASApp Testing Results:
Machine: hercules

Start: Wed Mar  5 12:06:55 CST 2025 on hercules-login-1.hpc.msstate.edu
---------------------------------------------------
Build:                                 *SUCCESS*
Build: Completed at Wed Mar  5 12:50:35 CST 2025
---------------------------------------------------
Tests: ctest -j12 -R gdasapp -E atm_jjob|C96C48_ufs_hybatmDA|C96C48_hybatmaerosnowDA|C48mx500_3DVarAOWCDA|C48mx500_hybAOWCDA|C96C48_hybatmDA
Tests:                                 *SUCCESS*
Tests: Completed at Wed Mar  5 12:51:48 CST 2025
Tests: 100% tests passed, 0 tests failed out of 33

@emcbot emcbot added hercules-GW-RT-Passed Automated testing with global-workflow successful on Hercules and removed hercules-GW-RT-Running Automated testing with global-workflow running on Hercules labels Mar 5, 2025
@guillaumevernieres guillaumevernieres added hera-GW-RT Queue for automated testing with global-workflow on Hera hercules-GW-RT Queue for automated testing with global-workflow on Hercules and removed hera-GW-RT-Passed Automated testing with global-workflow successful on Hera hercules-GW-RT-Passed Automated testing with global-workflow successful on Hercules labels Mar 5, 2025
@emcbot emcbot added hercules-GW-RT-Running Automated testing with global-workflow running on Hercules hera-GW-RT-Running Automated testing with global-workflow running on Hera and removed hercules-GW-RT Queue for automated testing with global-workflow on Hercules hera-GW-RT Queue for automated testing with global-workflow on Hera labels Mar 5, 2025
@RussTreadon-NOAA
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Install bugfix/prepinsitu inside stable-nightly infrastructure on Hera. Run marine DA CI with the following results

Test project /scratch1/NCEPDEV/da/Russ.Treadon/CI/GDASApp/stable/20250305/global-workflow/sorc/gdas.cd/build
      Start 2060: test_gdasapp_C48mx500_3DVarAOWCDA
 1/10 Test #2060: test_gdasapp_C48mx500_3DVarAOWCDA ....................................   Passed    8.41 sec
      Start 2061: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_stage_ic_202103241800
      Start 2062: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_waveinit_202103241800
 2/10 Test #2061: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_stage_ic_202103241800 .........   Passed   53.10 sec
      Start 2063: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_fcst_202103241800
 3/10 Test #2062: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_waveinit_202103241800 .........   Passed  311.62 sec
 4/10 Test #2063: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_fcst_202103241800 .............   Passed  721.75 sec
      Start 2065: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_marinebmat_202103250000
      Start 2064: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_prepoceanobs_202103250000
 5/10 Test #2064: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_prepoceanobs_202103250000 .....   Passed  522.83 sec
 6/10 Test #2065: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_marinebmat_202103250000 .......   Passed  1574.53 sec
      Start 2066: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_marineanlinit_202103250000
 7/10 Test #2066: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_marineanlinit_202103250000 ....   Passed  163.28 sec
      Start 2067: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_marineanlvar_202103250000
 8/10 Test #2067: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_marineanlvar_202103250000 .....   Passed  2715.07 sec
      Start 2068: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_marineanlchkpt_202103250000
 9/10 Test #2068: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_marineanlchkpt_202103250000 ...   Passed   93.18 sec
      Start 2069: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_marineanlfinal_202103250000
10/10 Test #2069: test_gdasapp_C48mx500_3DVarAOWCDA_gdas_marineanlfinal_202103250000 ...   Passed   89.91 sec

100% tests passed, 0 tests failed out of 10

Label Time Summary:
gdasapp    = 6253.67 sec*proc (10 tests)
script     = 6253.67 sec*proc (10 tests)

and

Test project /scratch1/NCEPDEV/da/Russ.Treadon/CI/GDASApp/stable/20250305/global-workflow/sorc/gdas.cd/build
      Start 2070: test_gdasapp_C48mx500_hybAOWCDA
 1/13 Test #2070: test_gdasapp_C48mx500_hybAOWCDA ....................................   Passed    9.34 sec
      Start 2073: test_gdasapp_C48mx500_hybAOWCDA_enkfgdas_stage_ic_202103241800
      Start 2071: test_gdasapp_C48mx500_hybAOWCDA_gdas_stage_ic_202103241800
 2/13 Test #2073: test_gdasapp_C48mx500_hybAOWCDA_enkfgdas_stage_ic_202103241800 .....   Passed   51.43 sec
      Start 2074: test_gdasapp_C48mx500_hybAOWCDA_enkfgdas_fcst_202103241800
 3/13 Test #2071: test_gdasapp_C48mx500_hybAOWCDA_gdas_stage_ic_202103241800 .........   Passed   52.74 sec
      Start 2072: test_gdasapp_C48mx500_hybAOWCDA_gdas_fcst_202103241800
 4/13 Test #2072: test_gdasapp_C48mx500_hybAOWCDA_gdas_fcst_202103241800 .............   Passed  704.37 sec
      Start 2075: test_gdasapp_C48mx500_hybAOWCDA_gdas_prepoceanobs_202103250000
 5/13 Test #2074: test_gdasapp_C48mx500_hybAOWCDA_enkfgdas_fcst_202103241800 .........   Passed  726.12 sec
      Start 2076: test_gdasapp_C48mx500_hybAOWCDA_gdas_marinebmat_202103250000
 6/13 Test #2075: test_gdasapp_C48mx500_hybAOWCDA_gdas_prepoceanobs_202103250000 .....   Passed  546.41 sec
 7/13 Test #2076: test_gdasapp_C48mx500_hybAOWCDA_gdas_marinebmat_202103250000 .......   Passed  1568.44 sec
      Start 2078: test_gdasapp_C48mx500_hybAOWCDA_gdas_marineanlinit_202103250000
      Start 2077: test_gdasapp_C48mx500_hybAOWCDA_gdas_marineanlletkf_202103250000
 8/13 Test #2078: test_gdasapp_C48mx500_hybAOWCDA_gdas_marineanlinit_202103250000 ....   Passed  167.93 sec
      Start 2079: test_gdasapp_C48mx500_hybAOWCDA_gdas_marineanlvar_202103250000
 9/13 Test #2079: test_gdasapp_C48mx500_hybAOWCDA_gdas_marineanlvar_202103250000 .....   Passed  2712.78 sec
      Start 2081: test_gdasapp_C48mx500_hybAOWCDA_gdas_marineanlchkpt_202103250000
10/13 Test #2077: test_gdasapp_C48mx500_hybAOWCDA_gdas_marineanlletkf_202103250000 ...   Passed  2883.90 sec
      Start 2080: test_gdasapp_C48mx500_hybAOWCDA_gdas_ocnanalecen_202103250000
11/13 Test #2081: test_gdasapp_C48mx500_hybAOWCDA_gdas_marineanlchkpt_202103250000 ...   Passed   85.60 sec
      Start 2082: test_gdasapp_C48mx500_hybAOWCDA_gdas_marineanlfinal_202103250000
12/13 Test #2080: test_gdasapp_C48mx500_hybAOWCDA_gdas_ocnanalecen_202103250000 ......   Passed   93.16 sec
13/13 Test #2082: test_gdasapp_C48mx500_hybAOWCDA_gdas_marineanlfinal_202103250000 ...   Passed   90.52 sec

100% tests passed, 0 tests failed out of 13

Label Time Summary:
gdasapp    = 9692.76 sec*proc (13 tests)
script     = 9692.76 sec*proc (13 tests)

Total Test time (real) = 5412.98 sec

ctests failures reported in issue #1521 pass with the changes in this PR.

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Marine DA g-w based ctests pass.

Approve.

@RussTreadon-NOAA RussTreadon-NOAA merged commit 632d7c8 into develop Mar 5, 2025
@RussTreadon-NOAA RussTreadon-NOAA deleted the bugfix/prepinsitu branch March 5, 2025 20:36
@emcbot
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emcbot commented Mar 5, 2025

Automated GW-GDASApp Testing Results:
Machine: hera

Start: Wed Mar  5 19:41:45 UTC 2025 on hfe11
---------------------------------------------------
Build:                                 *SUCCESS*
Build: Completed at Wed Mar  5 20:25:35 UTC 2025
---------------------------------------------------
Tests: ctest -j12 -R gdasapp -E atm_jjob|C96C48_ufs_hybatmDA|C96C48_hybatmaerosnowDA|C96C48_hybatmDA
Tests:                                 *SUCCESS*
Tests: Completed at Wed Mar  5 21:18:07 UTC 2025
Tests: 100% tests passed, 0 tests failed out of 56

@emcbot emcbot added hera-GW-RT-Passed Automated testing with global-workflow successful on Hera and removed hera-GW-RT-Running Automated testing with global-workflow running on Hera labels Mar 5, 2025
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emcbot commented Mar 5, 2025

Automated GW-GDASApp Testing Results:
Machine: hercules

Start: Wed Mar  5 13:42:27 CST 2025 on hercules-login-1.hpc.msstate.edu
---------------------------------------------------
Build:                                 *SUCCESS*
Build: Completed at Wed Mar  5 14:22:10 CST 2025
---------------------------------------------------
Tests: ctest -j12 -R gdasapp -E atm_jjob|C96C48_ufs_hybatmDA|C96C48_hybatmaerosnowDA|C96C48_hybatmDA
Tests:                                 *SUCCESS*
Tests: Completed at Wed Mar  5 15:47:21 CST 2025
Tests: 100% tests passed, 0 tests failed out of 56

@emcbot emcbot added hercules-GW-RT-Passed Automated testing with global-workflow successful on Hercules and removed hercules-GW-RT-Running Automated testing with global-workflow running on Hercules labels Mar 5, 2025
danholdaway added a commit that referenced this pull request Mar 26, 2025
* develop:
  added original date (#1570)
  Update OCEAN_BASIN_FILE_ORION path for marine ctest (#1569)
  Fixing window_begin and end in yaml for redating ADT (#1565)
  Save LETKF mean analysis and mean increment for verification (#1566)
  Update JEDI hashes (20250324) (#1567)
  Removes obsolete json files from marine bufr2ioda (#1564)
  Add hybrid 4denvar as a phase3 validation configuration (#1552)
  Bugfix/ocn ecen (#1550)
  Bugfix SSS obs for LETKF (#1560)
  Bugfix ocean ensemble recentering (#1558)
  apply ci path patch only when running g-w ctests (#1554)
  Update JEDI hashes (20250317)  (#1531)
  add option to create_experiment.py in create_exp.sh  (#1546)
  Update jcb hashes and support initial IODA stats capability (#1547)
  Fix GW-CI CTest dependencies (#1534)
  Converts prepoceanobs to use JCB-style obs list and config files (#1527)
  JEDI-based ensemble recentering and analysis calculation (#1488)
  tools for phase3 validation (#1526)
  Update JEDI hashes (20250306) (#1520)
  New jcb-gdas # and insitu obs prep bug fix  (#1523)
  Marine in situ obs update (SSS, moorings, drifters) (#1511)
  Save marine background and analysis spread (#1517)
  Minor build and install updates and ctest cleanup (#1512)
  correct logic for upper loop limit in chem_diagb (#1516)
  Incorporate multi-cycle concatination and separation of variables in post-BUFR observations (#1504)
  Update JEDI hashes (20250225) (#1475)
  Add a depth dependent e-fold scale (#1494)
  Update jcb and da-utils hashes to support land DA. (#1509)
  Add options to inflate the ensemble while recentering (#1501)
  Add components to use jcb yamls for marine letkf job (#1486)
  Add GNSSRO bufr2ioda and json files (#1448)
  Removal of the marine verification tools (#1499)
  update logic to identify MSU machine (#1498)
  IODA Converter with In-Situ Observations Concatenation and ObsError Inflation (#1472)
  Add sea ice recentering (#1478)
  marine vrfy bugfix (#1483)
  add LD_LIBRARY_PATH patch for wcoss2 build (#1484)
  Bugfix for ensemble recenter + add a test (#1477)
  Add code changes for the implementation of the  low-resolution B (#1441)
  update spack-stack path in Hera modulefiles (#1471)
  fixed glider output filename (#1469)
  add gdas_waveinit to C48mx500_3DVarAOWCDA ctest suite (#1470)
  update jcb-gdas hash 20250128 (#1466)
  Time series of omb stats and html doc (#1463)
  Update marine vrfy HTML codes (#1464)
  Automate the verify tools to submit from start pdy to end pdy (#1458)
  Update an offline marine vrfy tool (#1447)
  Update JEDI hashes (20250127) (#1460)
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test_gdasapp_C48mx500_3DVarAOWCDA_gdas_prepoceanobs_202103250000 fails

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