Eliminate _gfs, _gdas, etc, variables and add necessary if blocks#3420
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KateFriedman-NOAA merged 38 commits intoMar 14, 2025
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AntonMFernando-NOAA
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_gfs, _gdas, etc, variables and replace them with if blocks_gfs, _gdas, etc, variables and add necessary if blocks
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CI Tests set up to run in /lfs/h2/emc/ptmp/emc.global/PR/PR_3420/RUNTESTS on WCOSS |
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Tests are still running on Hera. |
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WCOSS2 CI completed successfully: |
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Still running on Hera as of March 13 12:52pm EST |
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CI Passed on Hera in Build# 3 |
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danholdaway
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Mar 26, 2025
* develop: Delete DATAROOT when running generate_workflows.sh (NOAA-EMC#3504) Fix 3244 garbled change (NOAA-EMC#3492) Enable ensemble archiving via Globus (NOAA-EMC#3479) Update MSU FIX_DIR paths (NOAA-EMC#3488) Updates for AOWCDA and hybatmaerosnowDA cases on Gaea C6 (NOAA-EMC#3487) Update GOCART path for GDAS/GFS/GCAFS implementations (NOAA-EMC#3455) Make RUN Variables Explicit in `config.resources` (NOAA-EMC#3478) Remove unused key from enkfgdas_earc_vrfy (NOAA-EMC#3473) Bug fix to the failing early cycle marine DA ensemble re-centering (NOAA-EMC#3454) Make marine LETKF optional (NOAA-EMC#3462) When sourcing for RUN=enkf*, use CASE_ENS (NOAA-EMC#3475) Updates for Gaea: verif-global tag, tracker tag, Fit2Obs tag, and C768 analysis resources (NOAA-EMC#3463) Update gefswave glo_025 mesh file with new mask (NOAA-EMC#3457) Update MSU glopara paths to new role-global space (NOAA-EMC#3443) Enable CI testing on AWS (NOAA-EMC#3459) Enable Gaea C5 Jenkins CI (NOAA-EMC#3447) Job reference removal from WMO product names (NOAA-EMC#3460) Turn off aerosol prognostic radiative feedback for GDAS NOAA-EMC#2926 (NOAA-EMC#3445) Add DO_GEMPAK check to postsnd subtask (NOAA-EMC#3451) Add a force option to setup_xml to ignore unwritable directories (NOAA-EMC#3448) Remove the eomg job (NOAA-EMC#3331) Migration to role account for Jenkins on Orion (NOAA-EMC#3440) Eliminate `_gfs`, `_gdas`, etc, variables and add necessary if blocks (NOAA-EMC#3420) Update workflow staging for sfcanl tiles and waveinit (NOAA-EMC#3429) Improve messaging to display clear warning when missing snogrb file (NOAA-EMC#3317) JEDI-based ensemble recentering and analysis calculation (NOAA-EMC#3312) Enable HPSS archiving on C5/6 (NOAA-EMC#3437) Check if HOMEDIR STMP and PTMP are writable (NOAA-EMC#3430) Update UFS_Utils and GFS-utils hashes to update Gaea support and ocean/ice post products (NOAA-EMC#3433) Enable C1152 forecasts on gaea C6 (NOAA-EMC#3438) Migration to role account for Jenkins on Hercules (NOAA-EMC#3423) Remove Direct Linking to COM from DATA for `extractvars` Job (NOAA-EMC#3379) Enable HPSS via Globus on Hercules and Orion Remove job name from product files & update GEMPAK module. (NOAA-EMC#3415) `link` instead of `copy` in staging jobs (NOAA-EMC#3410) Migrate CI Jenkins to role account on Hera (NOAA-EMC#3414) Add rocotorc documentation when using scrontab (NOAA-EMC#3417) Update jgdas atmos verfozn and verfrad with COMIN/COMOUT prefix instead of COM (NOAA-EMC#3342) Add configuration for empirically-corrected ozone parameters (NOAA-EMC#3386) Enable global-workflow to run C768C384 GSI on Gaea-C6 (NOAA-EMC#3412) Move logical checks into if blocks (NOAA-EMC#3339) Adding Jenkins CI to GaeaC6 using role account (NOAA-EMC#3389) Enable GDASApp g-w CI cases to run on wcoss2 (NOAA-EMC#3399) CI/CD Test on Gaea C5- And update config.gaea under ci/platform (NOAA-EMC#3280) Enable cycling support for Gaea C6 (NOAA-EMC#3323) Update enkf archive jobs to use COMIN/COMOUT (NOAA-EMC#3393) Copy marine ensemble output observation diags and spread (NOAA-EMC#3407) Ci testing on aws 2 (NOAA-EMC#3408) Disable METplus jobs on Hera (NOAA-EMC#3403) Add the mean EnKF soil increment to the deterministic member (NOAA-EMC#3295) Add mpich/8.1.19 to the WCOSS2 LD_LIBRARY_PATH for GDASApp jobs (NOAA-EMC#3396) Change order of RUNs (NOAA-EMC#3335) CI testing on aws (NOAA-EMC#3391) Rename Gulf of Mexico in bufr station list in GFSv17 (NOAA-EMC#3384) Enabling AWS CI/testing (NOAA-EMC#3383) Update issue templates to use new issue type field (NOAA-EMC#3369) Replace WAVECUR_DID variable with "rtofs" (NOAA-EMC#3337) Allow for C1152 ATM-Aero cycled DA to run on WCOSS2 (NOAA-EMC#3309) Remove Direct Linking to COM from DATA for `wavepostsbs` Job (NOAA-EMC#3303) Update jgdas enkf update job with COMIN or COMOUT prefix instead of COM (NOAA-EMC#3333) Add capability to run diff resolutions for marine anl and background (NOAA-EMC#3238) Update high resolution tests and fix minor wave issues (NOAA-EMC#3289) Add sfs as valid system (NOAA-EMC#3243) Add missing arch_tars dependencies (NOAA-EMC#3319) Fix the empty aerosol DA aerostat tar file issue (NOAA-EMC#3332) Add missing file safeguard for IMS prep in snow analysis tasks (NOAA-EMC#3329)
tsga
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May 1, 2025
* develop: Update GSI hash and GSI fix version to resolve bugs (NOAA-EMC#3626) Add missing marine DA files to archiving (NOAA-EMC#3596) Add a low resolution test to mimic GFSv17 cycling as much as possible (NOAA-EMC#3617) Add the setting to use the reject list for station t/q observations in GSI based soil DA (NOAA-EMC#3599) GitLab CI Framework for schedule PR cases and ctests on multi hosts (NOAA-EMC#3603) Avoid parallel restart I/O on WCOSS2 (NOAA-EMC#3615) Enables user toggling of GDASApp g-w ctests (NOAA-EMC#3587) COM variable updates for prep and some external downstream jobs (NOAA-EMC#3608) Remove MOS from system (NOAA-EMC#3612) Updates to enable soil DA (NOAA-EMC#3452) Unexport SHELLOPTS when running htar (NOAA-EMC#3601) Fix check for netcdf wave restart (NOAA-EMC#3594) Call err_chk/err_exit for fatal errors in post JJobs/ex-scripts (NOAA-EMC#3571) Remove support for Jet and S4 (NOAA-EMC#3572) Hotfix in GitLab pipline for Nightly (env MACHINE breaks build on head node) (NOAA-EMC#3578) [hotfix] Missed a path during merging develop (NOAA-EMC#3577) Prepare for ops readiness - part 1 (NOAA-EMC#3557) Update UFS weather-model to 20250328 hash (NOAA-EMC#3528) Fix SFS fcst config (NOAA-EMC#3574) Use err_chk in GDAS j-jobs (NOAA-EMC#3570) Perform compute builds on Gaea head nodes (NOAA-EMC#3560) Add initial capability to produce JEDI-based observation space summary stat files (NOAA-EMC#3471) Spread epos over more nodes on Hera to increase allocated memory (NOAA-EMC#3567) Create separate gists when multiple files are published on GitHub (NOAA-EMC#3551) Use err_chk in GSI J-Jobs and scripts (NOAA-EMC#3549) Add unified jinja obs list to marine DA (NOAA-EMC#3530) Save snow and aerosol analysis increments (and logs and YAMLs) every cycle (NOAA-EMC#3537) Add Dependencies to SFS Cleanup Job (NOAA-EMC#3559) Updates archiving to reflect current naming of marine anl output (NOAA-EMC#3541) Temporarily disable compute builds on C6 (NOAA-EMC#3558) Update gdas.cd hash to resolve msu prod_util failure (NOAA-EMC#3556) COMIN/COMOUT updates for enkf chgres and downstream product jobs (NOAA-EMC#3518) Call err_chk in forecast scripts for fatal errors (NOAA-EMC#3515) Add Rocoto Jobs for the Missing Products of GEFS (NOAA-EMC#3466) Download subset fix data with python script (NOAA-EMC#3400) Check that partition should be set (NOAA-EMC#3543) Rename wave output and refactor some wave scripts to use MPMD, and fix some bugzillas along the way (NOAA-EMC#3517) Add support for dual batch partitions on AWS NOAA-EMC#3483 Update CI build and run directories for GitLab Nightlies on C6 and added GitLab support on Hera (NOAA-EMC#3536) Hotfix path for CI in Jenkins on Gaea C6 to it's world-share path (NOAA-EMC#3532) Create single ocean grib2 product file (NOAA-EMC#3529) Scheduled Nightly CI/CD Pipeline Script in GitLab on Gaea C6 (NOAA-EMC#3493) make sure cold starts are handled correctly when DOIAU=YES (issue NOAA-EMC#3516) (NOAA-EMC#3520) Add check for DO_AERO_FCST before copying fv_tracer files (NOAA-EMC#3485) Use jinja templates instead of `@VARNAME@` in config files (NOAA-EMC#3411) Replace "status" (or comparable) with "err" in preparation for moving to err_chk/err_exit (NOAA-EMC#3507) Error in Java launch script for CI (NOAA-EMC#3465) Delete DATAROOT when running generate_workflows.sh (NOAA-EMC#3504) Fix 3244 garbled change (NOAA-EMC#3492) Enable ensemble archiving via Globus (NOAA-EMC#3479) Update MSU FIX_DIR paths (NOAA-EMC#3488) Updates for AOWCDA and hybatmaerosnowDA cases on Gaea C6 (NOAA-EMC#3487) Update GOCART path for GDAS/GFS/GCAFS implementations (NOAA-EMC#3455) Make RUN Variables Explicit in `config.resources` (NOAA-EMC#3478) Remove unused key from enkfgdas_earc_vrfy (NOAA-EMC#3473) Bug fix to the failing early cycle marine DA ensemble re-centering (NOAA-EMC#3454) Make marine LETKF optional (NOAA-EMC#3462) When sourcing for RUN=enkf*, use CASE_ENS (NOAA-EMC#3475) Updates for Gaea: verif-global tag, tracker tag, Fit2Obs tag, and C768 analysis resources (NOAA-EMC#3463) Update gefswave glo_025 mesh file with new mask (NOAA-EMC#3457) Update MSU glopara paths to new role-global space (NOAA-EMC#3443) Enable CI testing on AWS (NOAA-EMC#3459) Enable Gaea C5 Jenkins CI (NOAA-EMC#3447) Job reference removal from WMO product names (NOAA-EMC#3460) Turn off aerosol prognostic radiative feedback for GDAS NOAA-EMC#2926 (NOAA-EMC#3445) Add DO_GEMPAK check to postsnd subtask (NOAA-EMC#3451) Add a force option to setup_xml to ignore unwritable directories (NOAA-EMC#3448) Remove the eomg job (NOAA-EMC#3331) Migration to role account for Jenkins on Orion (NOAA-EMC#3440) Eliminate `_gfs`, `_gdas`, etc, variables and add necessary if blocks (NOAA-EMC#3420) Update workflow staging for sfcanl tiles and waveinit (NOAA-EMC#3429) Improve messaging to display clear warning when missing snogrb file (NOAA-EMC#3317) JEDI-based ensemble recentering and analysis calculation (NOAA-EMC#3312) Enable HPSS archiving on C5/6 (NOAA-EMC#3437) Check if HOMEDIR STMP and PTMP are writable (NOAA-EMC#3430) Update UFS_Utils and GFS-utils hashes to update Gaea support and ocean/ice post products (NOAA-EMC#3433) Enable C1152 forecasts on gaea C6 (NOAA-EMC#3438) Migration to role account for Jenkins on Hercules (NOAA-EMC#3423) Remove Direct Linking to COM from DATA for `extractvars` Job (NOAA-EMC#3379) Enable HPSS via Globus on Hercules and Orion Remove job name from product files & update GEMPAK module. (NOAA-EMC#3415) `link` instead of `copy` in staging jobs (NOAA-EMC#3410) Migrate CI Jenkins to role account on Hera (NOAA-EMC#3414) Add rocotorc documentation when using scrontab (NOAA-EMC#3417) Update jgdas atmos verfozn and verfrad with COMIN/COMOUT prefix instead of COM (NOAA-EMC#3342) Add configuration for empirically-corrected ozone parameters (NOAA-EMC#3386) Enable global-workflow to run C768C384 GSI on Gaea-C6 (NOAA-EMC#3412) Move logical checks into if blocks (NOAA-EMC#3339) Adding Jenkins CI to GaeaC6 using role account (NOAA-EMC#3389) Enable GDASApp g-w CI cases to run on wcoss2 (NOAA-EMC#3399) CI/CD Test on Gaea C5- And update config.gaea under ci/platform (NOAA-EMC#3280) Enable cycling support for Gaea C6 (NOAA-EMC#3323) Update enkf archive jobs to use COMIN/COMOUT (NOAA-EMC#3393) Copy marine ensemble output observation diags and spread (NOAA-EMC#3407) Ci testing on aws 2 (NOAA-EMC#3408) Disable METplus jobs on Hera (NOAA-EMC#3403) Add the mean EnKF soil increment to the deterministic member (NOAA-EMC#3295) Add mpich/8.1.19 to the WCOSS2 LD_LIBRARY_PATH for GDASApp jobs (NOAA-EMC#3396) Change order of RUNs (NOAA-EMC#3335) CI testing on aws (NOAA-EMC#3391) Rename Gulf of Mexico in bufr station list in GFSv17 (NOAA-EMC#3384) Enabling AWS CI/testing (NOAA-EMC#3383) Update issue templates to use new issue type field (NOAA-EMC#3369) Replace WAVECUR_DID variable with "rtofs" (NOAA-EMC#3337) Allow for C1152 ATM-Aero cycled DA to run on WCOSS2 (NOAA-EMC#3309) Remove Direct Linking to COM from DATA for `wavepostsbs` Job (NOAA-EMC#3303) Update jgdas enkf update job with COMIN or COMOUT prefix instead of COM (NOAA-EMC#3333) Add capability to run diff resolutions for marine anl and background (NOAA-EMC#3238) Update high resolution tests and fix minor wave issues (NOAA-EMC#3289) Add sfs as valid system (NOAA-EMC#3243) Add missing arch_tars dependencies (NOAA-EMC#3319) Fix the empty aerosol DA aerostat tar file issue (NOAA-EMC#3332) Add missing file safeguard for IMS prep in snow analysis tasks (NOAA-EMC#3329) Fix memory unsetting on Gaea (NOAA-EMC#3325) Fix error log parsing in compute build CI (NOAA-EMC#3301) Remove marineanlvrfy task from global-workflow (NOAA-EMC#3314) Add `gfs_wavepostpnt` dependencies to gfs_cleanup (NOAA-EMC#3313) Increase the GDASApp build wallclock (NOAA-EMC#3298) Capture build fail in Jenkins pipeline when no error logs are produced (NOAA-EMC#3297) Add/update config files for Gaea and check existence before sourcing config files in generate_workflows.sh (NOAA-EMC#3286) Fix ocean restarts when cold starting with DOIAU=YES (NOAA-EMC#3278) Splitting up the archive task (NOAA-EMC#3242) CTests extended validation for C48_ATM and staged C48_S2SW for gfs_fcst and gfs_atmos (NOAA-EMC#3256) Add esnowanl to enkfgfs cycle (NOAA-EMC#3283) Add gfs cycles to C48mx500_3DVarAOWCDA (NOAA-EMC#3249) Add fetch job and update stage_ic to work with fetched ICs (NOAA-EMC#3141) Remove WAFS files and references from `develop` (NOAA-EMC#3263) fix intel stack version number on c5 (NOAA-EMC#3258) Update gsi_monitor and ufs_utils hashes to recent hashes for C5/C6 build and run (NOAA-EMC#3252) Enable DA cycling on gaea C5/C6 (NOAA-EMC#3255) Copy post-processed sea ice increment for diagnostics (NOAA-EMC#3235)
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Description
Following Allow APP to differ between RUNs #2943, it should now be feasible to eliminate most, if not all, variables ending in _RUN from the configuration files and scripts, while incorporating necessary if blocks. These if blocks will trigger errors, serving as an indication that something is significantly wrong. This change will simplify both the resource calculations and the workflow, including the workflow setup scripts.
Resolves Issue Eliminate _gfs _gdas, etc, variables #3000
Refs Allow APP to differ between RUNs #2943
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How has this been tested?