v0.15.7

HDF5 v0.15.7

Diff since v0.15.6

Closed issues:

• reading with specified type (#854)
• With #839 you can now use the [] syntax instead of having to call read explicitly. (#858)
• Segmentation fault: SWMR is not thread safe (#860)
• type mismatching (#861)
• Cannot mmap datasets of type ComplexF32 (#863)
• Failing to precompile on powerpc? (#867)
• Dimension scales absent in implementation (#868)
• Update documentation for set_dims! (#872)

Merged pull requests:

• Fix #863, support mmapping complex arrays (#864) (@jmert)
• Fix set_dims deprecation (#873) (@musm)

v0.15.6

HDF5 v0.15.6

Diff since v0.15.5

Closed issues:

• FileIO integration (#278)
• How to read attributes (#824)
• create_attribute fail (#836)
• create_attribute fail to write value (#837)
• Base.getindex not implemented for Attribute type (#838)

Merged pull requests:

• Add FileIO interface (#782) (@musm)
• H5D dataset API coverage, h5d_write_chunk, h5d_read_chunk (#825) (@mkitti)
• Update docs on using custom HDF5 libraries (#831) (@jipolanco)
• Support Base.getindex(::Attribute, I...) (#839) (@david-macmahon)
• Add filter keyword argument to create_dataset (#840) (@david-macmahon)
• Test fixing CI for apt-get packages (#841) (@musm)
• Tweak docstrings and style for latest chunk related dataset methods (#842) (@musm)
• Silence test errors (#843) (@musm)
• Use custom error handler (#844) (@simonbyrne)
• Move C API to submodule (#845) (@simonbyrne)
• Fix docs due to module changes (#846) (@musm)
• docs: Instructions on how to read value of attribute (#849) (@johnbcoughlin)
• Only update deps.jl if contents need to change - Avoids unnecessary re-precompilation (#855) (@IanButterworth)

v0.15.5

HDF5 v0.15.5

Diff since v0.15.4

Closed issues:

• Problem with adding the package (#820)

Merged pull requests:

• Add module scoping to unexported functions in docs (#823) (@kimlaberinto)
• Update CI.yml to use apt-get since it's the stable CLI interface (#830) (@musm)
• Allow attributes on types (#832) (@eschnett)

v0.15.4

HDF5 v0.15.4

Diff since v0.15.3

Closed issues:

• Fatal error in Julia 1.4 (#814)

Merged pull requests:

• Change ccall wrapper signature of h5a_iterate and h5l_iterate (#817) (@jmert)

v0.15.3

HDF5 v0.15.3

Diff since v0.15.2

Closed issues:

• Multi-dimensional arrays have reversed order if loaded by h5py in Python3 (#785)
• Support for AArch64 (#811)
• Avoid creating cfunction closures (#813)

Merged pull requests:

• Add row/column-major order documentation (#805) (@qin-yu)
• Simplify downstream package integration CI action (#809) (@musm)
• Move silence errors to midlevel and remove straggling definition of rehash (#810) (@musm)
• Avoid using cfunction runtime closures in iteration callback (#812) (@jmert)

v0.15.2

HDF5 v0.15.2

Diff since v0.15.1

Closed issues:

• "Error Iterating attributes in object" on valid HDF5 file (#807)

Merged pull requests:

• Do not try to show attributes of an Attribute (#808) (@jmert)

v0.15.1

HDF5 v0.15.1

Diff since v0.15.0

Closed issues:

• 0.15 release tracker and discussion (#766)
• HDF5 0.15.0 is not backwards compatible with JULIA_HDF5_LIBRARY_PATH (#803)

Merged pull requests:

• Fixup setting system lib env var and clean up documentation (#806) (@musm)

v0.15.0

HDF5 v0.15.0

Diff since v0.14.3

Closed issues:

• Not yet supported error from dump (#223)
• Performance Issue when closing HDF5.jl (#413)
• `Error getting number of members' (#470)
• Error building HDF5.jl package on Raspberry Pi (#588)
• Matlab datetime / H5Aopen(): unable to load attribute info from object header for attribute: 'MATLAB_class' (#626)
• Performance regression in h5read (#752)
• Deprecation errors on load (#784)
• Displaying H5 File Structure Gets Stuck (#786)
• Precompile fails on 32bit linux (#789)
• Stack overflow opening HDF5 file (#800)
• The time to close a .h5 file increases if you repeatedly open and close it (#801)

Merged pull requests:

• WIP: Support reading opaque data recursively (#747) (@jmert)
• RFC: Use fewer objects in h5open and read (#762) (@jmert)
• Delete straggling _h5open method (#764) (@musm)
• Replace incorrect dtype.id -> dtype (#765) (@jmert)
• Use sizeof for Datatype (#767) (@musm)
• Automatically convert C Int types to Julia's Int type for convenience (#768) (@musm)
• Fixup return type error checks for Csize_t (#769) (@musm)
• Perf: return empty string instead of nothing in split1 (#770) (@musm)
• Update Documenter.yml (#771) (@musm)
• Update Integration to run on latest Julia release (#772) (@musm)
• Update Documenter.yml (#773) (@musm)
• Check if object exists before create_(dataset|group) (#775) (@musm)
• Delete straggling create_dataset method (#776) (@musm)
• Wrap a subset of the libhdf5 table interface methods (#777) (@musm)
• Fix error message for KeyError (#778) (@musm)
• Ensure unpad output is a concrete String type (#779) (@musm)
• Fix ishdf5 error handling and improve general error silencing (#780) (@musm)
• Relax libhdf version and update CI to test system libhdf5 (#781) (@musm)
• Grab keys via callback iteration rather than many absolute calls (#787) (@jmert)
• Add some print-limiting heuristics to default show (#788) (@jmert)
• Remove v0.14 deprecations (#790) (@musm)
• Remove doc logo and tweak CI (#793) (@musm)
• Have the binding generator build automatic doc strings for all functions (#795) (@jmert)
• Improve error handling (#797) (@musm)
• Deprecate get_dims and set_dims! (#798) (@musm)

v0.14.3

HDF5 v0.14.3

Diff since v0.14.2

Closed issues:

• slow writing (#170)
• Intermittent "H5Fget_obj_count(): not a file id" again (#235)
• Single column from dataset returns Matrix, not Vector (#267)
• Dealing with arrays of Booleans (#403)
• how to write string in HDF5 file? datatype(String) not works . (#461)
• HDF5 unable to create file error (#475)
• Julia crashes when saving using invalid characters on windows (#486)
• An array saved on Julia 0.6.3 gets messed up on Julia 1.0.0 (#522)
• Do syntax not documented in doc/hdf5.md (#532)
• Possibility to use system provided HDF5 binary (#577)
• Very slow reading of long strings in v0.14 (#742)

Merged pull requests:

• Fix #742, avoid instantiating large tuples (#745) (@jmert)
• Extend Base.hash rather than creating proviate hash (#757) (@jmert)
• Add size, ndims, length, etc methods to Dataspace (#758) (@jmert)
• Add binding for H5Tenum_insert (#759) (@david-macmahon)
• Update h5t_equal definition to automatically return Bool (#761) (@jmert)

v0.14.2

HDF5 v0.14.2

Diff since v0.14.1

Closed issues:

• Skipping result because field "fptr" is a pointer (#110)
• JLD.load triggers libhdf5 error when reading in 0-row dataset (#124)
• Enable Blosc compression of JLD files by default? (#178)
• Shared arrays no longer shared after loaded from jld file (#182)
• sparse jld file saved in win not work in linux (#202)
• Allow non-literal bitstype immutables as type parameters (#204)
• JLD slow/inefficient for Graphs.jl graphs (#208)
• JLD interoperability between 32 and 64 bits (#209)
• type containing Vector{Int} fails to read (#225)
• Reading a part of an HDF5Compound dataset (#427)
• How to extract layer from h5? (#431)
• Dimension inconsistencies for setting/getting values? (#551)
• h5read dimensions (#576)
• write hd5 file with custom data (#582)
• is_chunked function? (#727)
• Cannot compile [email protected]+1 (#751)

Merged pull requests:

• Upgrade HDF5 to v1.12 (#739) (@musm)
• Misc refactoring and add iscompact/iscontiguous (#740) (@musm)
• Restrict HDF5_jll to v1.10 series (#743) (@jmert)
• Use Int type params in FixedString (#746) (@jmert)
• Add custom printing for Dataspaces (#748) (@jmert)
• Optimize get_dims and truncate return type to Int (#749) (@musm)
• Switch from defining Base.convert to Base.cconvert on HDF5 objects (#750) (@jmert)
• Avoid creating default properties unnecessarily (#753) (@jmert)
• Close objects in h5* immediate functions (#754) (@jmert)
• Limit HDF5_jll compatible versions (#755) (@jmert)