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Added optional workflow steps for the calculation of min/max T & RH over previous day at 07Z and 19Z as well as the production of SPC-specific prdgen output files.#567

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Added optional workflow steps for the calculation of min/max T & RH over previous day at 07Z and 19Z as well as the production of SPC-specific prdgen output files.#567
EdwardColon-NOAA wants to merge 401 commits into
NOAA-GSL:developfrom
EdwardColon-NOAA:feature/minmaxTRH

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chunhuazhou and others added 30 commits November 5, 2021 19:25
…OAA-GSL#248)

* Changes for initializing ensemble from GDASENKF netcdf files on HERA

* Fix FV3GFS data path and filename on HERA

* Removing old lines related to Hera data path
…SL#249)

* Changes to exregional_run_post.sh required to run new EMC UPP.  Script changes involve new namelist syntax in itag file.

* Indenting model_inputs namelist lines per suggestion from Guoqing.
* Minor fixes for EnKF cycling

* Get model specific nlevs for EnKF namelist

* More fixes for running EnKF on CONUS_3km domain
1) remove checksum from restart files
2) update field_table
3) turn on GSL drag suite.
… larger ensemble size (NOAA-GSL#257)

* Changes for running EnKF more efficiently and fixing EnKF crashes for larger ensemble size

* Simplify  config.sh.RRFS_CONUS_3km

* Simplify  config.sh.RRFS_CONUS_13km
…t to write restart files. (NOAA-GSL#256)

&fms2_io_nml
    netcdf_default_format="netcdf4"
/

2) Bug fix to GVF update.
3) update location of the retro GVF and snow files
…OAA-GSL#258)

* Add clean-up for EnKF temporary files to save disk usage

* Saving EnKF standard output in nwges

* More cleaning of EnKF temporary files

* Changing back to copy, to avoid removing the linked files during clean up
* Fixing namelist for observer run and core usage

* Reduce core usage for observer runs

* changing ens_type to rrfsens_type because ens_type is already used in scripts/exregional_run_analysis.sh
* Update the regional workflow to handle subdomain restart files.

* Update configure file for NA 3km to use io_layout_y=10

* Add gsi fix files (subdomain grid spec files) for NA 3km when io_layout(2)=10
Add gsi fix files for CONUS 25km grid
…NOAA-GSL#262)

* Changes needed to configure all subdomains.

* Update run script for subdomains.
* 1. update cloud process scripts to match the new code of
     processing cloud observations over esg grid directly.
2. Update scripts to do radar tten and cloud analysis with subdomain restart files.

* Update cloud analysis scripts based on comments.
* add NA_3km configure for wcoss

* add path of SST_ROOT on WCOSS

* add NA-3km configure file on WCOSS

* merge config.sh.RRFS_NA_3km_wcoss to config.sh.RRFS_NA_3km

* delete config.sh.RRFS_NA_3km_wcoss

* use SST file from the previous day if SST file is late on WCOSS

* setup wcoss parameters in configure file

* update parameters
NOAA-GSL#281)

2) remove namelist for NST because it is removed from FV3_HRRR physics suite.
3) use nord=3 and d4_bg=0.12
hu5970 and others added 26 commits June 26, 2023 11:12
* fix/lam/RRFS_NA_3km point to RRFS_NA_3km_C3463_Lake_fracSV

* updates from WCOSS2 and Hera for running NA 3km grid.
… the first model forecast output file, (NOAA-GSL#541)

which is named based on the time step when write out 15 min output.

2) Keep 1-h as the average period for 15 minute output.

3) Continue adding setups for parallel cloud analysis
…AWP, BGRD3D, BGIFI, BGSFC) in prdgen (NOAA-GSL#542)

2) update python scripts to use new file names.
Co-authored-by: ming hu <ming.hu@dlogin05.dogwood.wcoss2.ncep.noaa.gov>
1. fix SST_ROOT bug on WCOSS2
2. set PPT = 0.5
3. set fhcyc = 0
4. add link to fvcom_mask.nc
5. clean forecast netcdf after post.
6. remove "beta1_inv=0.0" from exregional_run_analysis.sh (line 677)

Co-authored-by: ming hu <ming.hu@dlogin04.dogwood.wcoss2.ncep.noaa.gov>
Co-authored-by: ming hu <ming.hu@clogin08.cactus.wcoss2.ncep.noaa.gov>
running retros on wcoss2 with CONUS 3km grid.

Co-authored-by: ming hu <ming.hu@clogin01.cactus.wcoss2.ncep.noaa.gov>
* Update regional workflow based on the tests from:
1) RRFS_A v0.6.1 on Cactus
2) summer retro of RRFS determinstic, EnKF DA, ensemble forecast on CONUS 3km on WCOSS2
3) summer retro of EnKF DA on CONUS 3km on Hera

* Remove "export FORT_FMT_NO_WRAP_MARGIN=true" on WCOSS2 model forecast.
This solved the problem that "-DFASTER=ON" hangs the forcast.
This fixed a bug in RRFS_A for using FVCOM.

Co-authored-by: ming hu <ming.hu@dlogin05.dogwood.wcoss2.ncep.noaa.gov>
1) add namelist options for running CLM
2) add diag file for CLM
3) add lake surgery
…when running SDLVDL (NOAA-GSL#562)

Increase node usage for recentering
Co-authored-by: ming hu <ming.hu@clogin07.cactus.wcoss2.ncep.noaa.gov>
…capability of generating a Storm Prediction Center relevant prdgen output file.
Removed "_test" suffice from RTMA working directories.
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