Retire wk-connect #7032
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Retire wk-connect #7032
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…ove_wkconnect * 'master' of github.com:scalableminds/webknossos: Update docker compose commands + dev install readme (#7002) Add segment groups (#6966) Add screenshot nightly test for wkorg (#7030) Workaround for WebGL crash for datasets with many segmentation layers (#6995) Fix download of public annotation, include access ctx in user cache key (#7025) Fix that changing a segment color could lead to a crash (#7000) Add more error chaining to annotation download (#7023) Guard against NaNs in shader (#7018) Store editable mappings in multiple fossildb columns+keys (#6903) Context action to move tree to group (#7005) Release 23.05.0 (#7014) Remove vault cache when reloading dataset (#7007) Fix viewing of public datasets (#7010) Update screenshots scalebar positioning (#7003) Update team members (#6999)
…s into remove_wkconnect * 'remove_wkconnect' of github.com:scalableminds/webknossos: update snapshots
…os into remove_wkconnect * 'no-more-wkconnect' of github.com:scalableminds/webknossos: Fix exception in applying UpdateTreeGroupVisibility skeleton action (#7037) Fix organization storage layouting (#7034) adapt schema version numbers adapt schema number changelog + migration guide delete datastore in migration. add changelog snapshots, test db remove isConnector property for datastores
4 tasks
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@hotzenklotz or anyone who is familiar with this, could you double-check that the webknossos-libs can still talk to webknossos on this branch? There are some occurences of the isConnector property in the python client, but maybe that is not a problem, I’m not sure if it is used https://github.com/scalableminds/webknossos-libs/search?q=isconnector |
philippotto
reviewed
May 4, 2023
docs/export.md
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| @@ -4,7 +4,7 @@ We believe in using the best tool for the job and WEBKNOSSOS makes it easy to do | |||
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| ## Data Export through Zarr Streaming | |||
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| Any dataset and volume annotation in WEBKNOSSOS can also be accessed by third-party software through the Zarr streaming interface. In other words, WEBKNOSSOS is a fully, capable server for streaming data according to the Zarr spec to any client and can be viewed as an alternative to cloud storage options such as S3/Google Cloud. | |||
| Any dataset and volume annotation in WEBKNOSSOS can also be accessed by third-party software through the Zarr streaming interface. In other words, WEBKNOSSOS is a fully, capable server for streaming data according to the Zarr spec to any client and can be viewed as an alternative to cloud storage options such as AWS S3/Google Cloud. | |||
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| Any dataset and volume annotation in WEBKNOSSOS can also be accessed by third-party software through the Zarr streaming interface. In other words, WEBKNOSSOS is a fully, capable server for streaming data according to the Zarr spec to any client and can be viewed as an alternative to cloud storage options such as AWS S3/Google Cloud. | |
| Any dataset and volume annotation in WEBKNOSSOS can also be accessed by third-party software through the Zarr streaming interface. In other words, WEBKNOSSOS is a fully, capable server for streaming data according to the Zarr spec to any client and can be viewed as an alternative to cloud storage options such as AWS S3 or Google Cloud. |
Co-authored-by: Philipp Otto <[email protected]>
frcroth
reviewed
May 5, 2023
Co-authored-by: frcroth <[email protected]>
Co-authored-by: frcroth <[email protected]>
Co-authored-by: Philipp Otto <[email protected]>
…ove_wkconnect * 'master' of github.com:scalableminds/webknossos: (33 commits) Fix bug in fallback rendering when layer has missing mags (#7082) Fix duplicate on volumes with no fallback layer (#7085) fix scrolling in organization switcher in terms-of-services modal (#7083) Auto-Select via SAM (#7051) Build STL in chunks when exporting them (#7074) Improve performance for large (oversegmentation) meshes (#7077) Fix display of used storage in power plan (#7057) Fix user limits for invites (#7078) adds fileSize to voxelytics workflow list (#7071) Improve error logging for bucket requests (#7053) Fix zarr streaming datasource-properties.json generation for non-wkw/zarr datasets (#7065) Min length for layer names is one (#7064) Include voxelytics workflow name in tab title (#7070) Fix local to global layer index look up (#7066) Merge editable mappings (#7026) store correct artifacts for wkorg nightly (#7060) Team edit modal (#7043) Fix voxel offset in chunk name for unsharded neuroglancer precomputed datasets (#7062) Fix offset when loading non-aligned buckets for zarr/n5/precomputed (#7058) fixes wallTimes query for workflow reports (#7059) ...
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@fm3 Can you please refresh the snapshots once more to make the CI happy. Thanks |
…s into remove_wkconnect * 'remove_wkconnect' of github.com:scalableminds/webknossos: Update docs/index.md Update docs/export.md Update MIGRATIONS.unreleased.md Update CHANGELOG.unreleased.md refresh snapshots
normanrz
approved these changes
May 31, 2023
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(merge this only after the remaining connect datastores have been shutdown)
PR removes wk-connect integration from WK frontend. Neuroglancer Precomputed, Zarr, and N5 dataset can now be streamed/loaded natively from the cloud by WEBKNOSSOS instead.
Changes:
Steps to test:
Issues:
(Please delete unneeded items, merge only when none are left open)