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R3.8.2 #6160

Merged
merged 41 commits into from
Sep 1, 2021
Merged

R3.8.2 #6160

merged 41 commits into from
Sep 1, 2021

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kmuriki
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@kmuriki kmuriki commented Sep 1, 2021

Description of the Pull Request (PR):

Changelog updates in preparation for R3.8.2

Before submitting a PR, make sure you have done the following:

dependabot bot and others added 30 commits August 10, 2021 05:20
Bumps [github.com/opencontainers/selinux](https://github.com/opencontainers/selinux) from 1.8.3 to 1.8.4.
- [Release notes](https://github.com/opencontainers/selinux/releases)
- [Commits](opencontainers/selinux@v1.8.3...v1.8.4)

---
updated-dependencies:
- dependency-name: github.com/opencontainers/selinux
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
Bumps [github.com/google/uuid](https://github.com/google/uuid) from 1.2.0 to 1.3.0.
- [Release notes](https://github.com/google/uuid/releases)
- [Commits](google/uuid@v1.2.0...v1.3.0)

---
updated-dependencies:
- dependency-name: github.com/google/uuid
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>
…ster/github.com/google/uuid-1.3.0

chore(deps): bump github.com/google/uuid from 1.2.0 to 1.3.0
…ster/github.com/opencontainers/selinux-1.8.4

Bump github.com/opencontainers/selinux from 1.8.3 to 1.8.4
Bumps [github.com/containers/image/v5](https://github.com/containers/image) from 5.15.0 to 5.15.2.
- [Release notes](https://github.com/containers/image/releases)
- [Commits](containers/image@v5.15.0...v5.15.2)

---
updated-dependencies:
- dependency-name: github.com/containers/image/v5
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <[email protected]>
…ster/github.com/containers/image/v5-5.15.2

chore(deps): bump github.com/containers/image/v5 from 5.15.0 to 5.15.2
Sometime the Debian arch string is not identical to the `runtime.GOARCH`
value for a platform. Map from `runtime.GOARCH` to the Debian arch to
address this.

Fixes: singularity-ce apptainer#204
When the destination of a line in the `%files` section is ommitted, the
file should be copied to the same full path within the destination
rootfs as it is in the source.

Previously we naively set dst = src in this case, but src might be a
globbing pattern. In this case the file copy destination was the glob
pattern, not the matched path(s) after globbing.

Handle a blank "" dest in the CopyFromHost / CopyFromStage functions,
where globbing occurs. Copy to the correct full path after globbing.
Update tests to capture this behavior.

Fixes apptainer#196
`singularity delete` would accept a hostname in the library:// URI
provided, but would perform the request against the default remote.

Fix this, so it is handled in the same way as for push/pull.

Fixes singularity-ce apptainer#243
Be much more explicit in what a remote endpoint is vs OCI credentials.
Generally expand the descriptive text.
Repeated `remote login` with the same URI can cause duplicate
`Credentials` entries in `~/remote.yaml`.

Ensure a `remote login` with an existing configured URI replaces the
existing entry. Make `remote logout` remove all entries to clean up the
result of this bug.

Fixes apptainer#214
The Sylabs lolcow image has been modified so that it no longer uses
`fortune`, which produced offensive output. Ensure all references to a
lolcow image are to the fixed Sylabs version.

Fixes apptainer#248
If the system page size is not 2MB just test cgroups without a hugetlb
limit, rather than putting in more complex logic to work up configs for
different page sizes.

Fixes #9
When the source in a `%files` entry is a glob that matches multiple files, and the destination is `""`, make sure we always set the correct real destination for each file.

Fixes apptainer#261
We were previously setting `--user-xattrs` / `--no-xattrs` based on
the current euid when calling `unsquashfs`. However, in a non-setuid
install `--fakeroot` build the euid is 0, so the flags will not be
set. On distributions other than EL / Fedora (i.e. Debian / Ubuntu
which are not selinux native), this can cause failed extraction.

Decide if we are performing a rootless extraction based on the host
uid, outside of any namespace that is in play.

Fixes: apptainer#266
Bumps [github.com/sylabs/scs-build-client](https://github.com/sylabs/scs-build-client) from 0.1.6 to 0.2.1.
- [Release notes](https://github.com/sylabs/scs-build-client/releases)
- [Commits](sylabs/scs-build-client@v0.1.6...v0.2.1)

---
updated-dependencies:
- dependency-name: github.com/sylabs/scs-build-client
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>
Pull in PRs from sylabs/singularity 3.8.2 release
Changes to exit handling with the implementation of trap in mvdan.cc/sh
mean that we need to interpret individual `syntax.Stmt`, rather than a
full parsed `syntax.File` when we are handling built-ins prefixed with
`\` in `internalExecHandler`.

Fixes sylabs/singularity#274
dtrudg and others added 11 commits August 30, 2021 14:10
…ster/github.com/sylabs/scs-build-client-0.2.1

chore(deps): bump github.com/sylabs/scs-build-client from 0.1.6 to 0.2.1
Bumps [github.com/hpcng/sif](https://github.com/hpcng/sif) from 1.5.1 to 1.6.0.
- [Release notes](https://github.com/hpcng/sif/releases)
- [Commits](apptainer/sif@v1.5.1...v1.6.0)

---
updated-dependencies:
- dependency-name: github.com/hpcng/sif
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <[email protected]>
…ster/github.com/hpcng/sif-1.6.0

chore(deps): bump github.com/hpcng/sif from 1.5.1 to 1.6.0
@kmuriki kmuriki merged commit ee8f485 into apptainer:release-3.8 Sep 1, 2021
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4 participants