Address compilation warnings and merge develop into dev/ufs-weather-model

[mingchen-NOAA]

Pull Request Summary

This addresses warnings during compilation for GFSv17.

Description

This PR merges in develop and fixes compilation warnings:

• add only clause to use statement in w3wavemd and fix USE MODULE remarks #1520
• fix Fortran compile flag scope to avoid ifx real-size override warning in WW3 and operational workflow #1522
• replace EXTERNAL declarations with INTERFACE and CONTAINS for safer procedure referencing #1521
• fix SCOTCH and MPI_COMM_RANK explicit-interface warnings for debug build #1531
• fix MPI_WTIME interface warning in debug build using mpi_f08 #1530
• and some bug fixes

Issue(s) addressed

No specifically but solves multiple for dev/ufs-weather-model branch

Commit Message

Merging a PR and develop to fix warnings during compilation

Check list

• Branch is up to date with the authoritative repository (NOAA-EMC) develop branch.
• Checked the checklist for a developer submitting to develop.
• If a version number update is required, checked the updating version number checklist.
• If a new feature was added, a regression test for testing the new feature is added.

Testing

• How were these changes tested?
• Are the changes covered by regression tests? (If not, why? Do new tests need to be added?)
• Have the matrix regression tests been run (if yes, please note HPC and compiler)?
• Please indicate the expected changes in the regression test output, (Note the list of known non-identical tests.)
• Please provide the summary output of matrix.comp (matrix.Diff.txt, matrixCompFull.txt and matrixCompSummary.txt):

[JessicaMeixner-NOAA]

While typically not required, to ensure we don't have unanticipated diffs with GFSv17, I also ran the WW3 regression tests. The diffs are:

**********************************************************************
********************* non-identical cases ****************************
**********************************************************************
mww3_test_03/./work_PR3_UQ_MPI_e                     (1 files differ)
mww3_test_03/./work_PR3_UQ_MPI_d2_c                     (17 files differ)
mww3_test_03/./work_PR1_MPI_d2                     (16 files differ)
mww3_test_03/./work_PR2_UNO_MPI_d2                     (15 files differ)
mww3_test_03/./work_PR2_UNO_MPI_e                     (1 files differ)
mww3_test_03/./work_PR3_UQ_MPI_d2                     (16 files differ)
mww3_test_03/./work_PR3_UQ_MPI_e_c                     (1 files differ)
mww3_test_03/./work_PR1_MPI_e                     (1 files differ)
mww3_test_03/./work_PR2_UQ_MPI_e                     (1 files differ)
mww3_test_03/./work_PR2_UQ_MPI_d2                     (15 files differ)
mww3_test_03/./work_PR3_UNO_MPI_d2_c                     (16 files differ)
mww3_test_03/./work_PR3_UNO_MPI_e                     (1 files differ)
mww3_test_03/./work_PR3_UNO_MPI_d2                     (17 files differ)
mww3_test_03/./work_PR3_UNO_MPI_e_c                     (1 files differ)
mww3_test_09/./work_MPI_ASCII                     (0 files differ)
ww3_tp2.10/./work_MPI_OMPH                     (6 files differ)
ww3_tp2.21/./work_b_metis                     (1 files differ)
ww3_tp2.3/./work_PR2_UQ                     (6 files differ)
ww3_tp2.3/./work_PR1                     (6 files differ)
ww3_tp2.3/./work_PR2_UQ_MPI                     (6 files differ)
ww3_tp2.3/./work_PR1_MPI                     (6 files differ)
ww3_tp2.3/./work_PR3_UQ                     (6 files differ)
ww3_tp2.3/./work_PR3_UQ_MPI                     (6 files differ)
ww3_tp2.3/./work_PR3_UNO                     (6 files differ)
ww3_tp2.3/./work_PR3_UNO_MPI                     (6 files differ)
ww3_tp2.3/./work_PR2_UNO_MPI                     (6 files differ)
ww3_tp2.3/./work_PR2_UNO                     (6 files differ)
ww3_tp2.6/./work_ST4_ASCII                     (0 files differ)
ww3_ufs1.1/./work_unstr_b                     (808 files differ)
ww3_ufs1.1/./work_unstr_a                     (797 files differ)
ww3_ufs1.1/./work_unstr_d                     (directory not found)
ww3_ufs1.1/./work_unstr_c                     (807 files differ)
ww3_ufs1.3/./work_a                     (3 files differ)

Note the tp2.3 diffs are from #1517
and the ufs1.1 are from #1507
There are no "answer" changes for what will be run in GFSv17, however we do have fixes for compiler warnings.

Additionally updates for using implicit scheme (if chosen) are added. These are currently not used but now would be available in the code.

[gspetro-NOAA]

@mingchen-NOAA Could you please update the WW3 hash for this PR so that we can pull it into WM #2979 and begin testing?

[mingchen-NOAA]

@gspetro-NOAA It is already up-to-date with dev/ufs-weather-model branch.

In WW3, we have a separate branch for UFSWM, see comparison.

[gspetro-NOAA]

Testing completed successfully on WM parent PR 2979. This PR can be merged.