Read the std. dev. instead of the variance#896
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travissluka merged 4 commits intodevelopfrom Jun 13, 2023
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Oops ... I might have clicked the green check too quickly on soca/pull/887 @travissluka . There are relative paths in |
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@travissluka , @kbhargava : I'm marking this as "ready", the build failure in the |
travissluka
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Jun 12, 2023
Co-authored-by: Travis Sluka <tsluka@ucar.edu>
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Jun 13, 2023
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* Use SABER blocks chaining for training (#852) * Adapt to name changes in ufo (#867) * Use VertInterp instead of MarineVertInterp (#874) * remove linear var change from ensevariance ctest (#881) * Bugfixes for BUMP (#869) * A few fixes to the Model to Analysis variable change (#847) * Remove discontinuities in the balance op (#885) * set to min/max instead of 0 * ... * vanilla vert conv * tidy sign * removed jac_mask * tanh filt * updated yamls and test refs * merge develop and update answers after the develop history MESS i created * code tidy/removed vanilla --------- Co-authored-by: Travis Sluka <tsluka@ucar.edu> * default plots (#888) Co-authored-by: Travis Sluka <tsluka@ucar.edu> * add VADER to SOCA (#887) * add vader to build, but dont use it * add State::fromFieldSet * variablechange "uses" vader * switched to ens. templ. (#894) * Implementation of EnsMeanAndVariance (#892) * added the ensmeanandvariance app * ... --------- Co-authored-by: Travis Sluka <tsluka@ucar.edu> * Read the std. dev. instead of the variance (#896) * skip sqrt, saving optional * forgot test yaml * Update test/testinput/varchange_bkgerrsoca_stddev.yml Co-authored-by: Travis Sluka <tsluka@ucar.edu> --------- Co-authored-by: Travis Sluka <tsluka@ucar.edu> * Use the generic oops interpolator (#898) * use oops interpolation * to_fieldset_ad * forgot some halo masks * fix horizfilt * fix some test answers * letkf workaround for missing val bug * work around for getvalues test * change obs input to have 1 guaranteed land point * Update version (#899) * remove ewok repo (#889) Co-authored-by: Yannick Trémolet <30638944+ytremolet@users.noreply.github.com> * Merge B matrix-related applications (#890) * Merge B matrix-related applications * Trigger tests --------- Co-authored-by: Benjamin Menetrier <benjamin.menetrier@irit.fr> Co-authored-by: Travis Sluka <tsluka@ucar.edu> * update for VADER PR#586 (#902) * add ModelData * fix coding norms * Update CMakeLists.txt * Fix vertical gradient (#914) * a fix dvdz * Updating test references --------- Co-authored-by: Hyun-Chul.Lee <Hyun-Chul.Lee@noaa.gov> * libs in soca * Commend out dirac.x test and disable ecbuild_install_project as we did for fv3-jedi prevent the following error: -- Configuring done CMake Error in soca/src/soca/CMakeLists.txt: Target "soca" INTERFACE_LINK_DIRECTORIES property contains path: "/Users/heinzell/work/ufs-bundle/20230714/ufs-bundle-use-jedi-develop/soca/src/soca/." which is prefixed in the source directory. -- Generating done CMake Generate step failed. Build files cannot be regenerated correctly. * Apply same bug fix as for fv3-jedi to fix missing linker path for MPI libraries due to ESMF bug --------- Co-authored-by: Benjamin Menetrier <benjamin.menetrier@irit.fr> Co-authored-by: Wojciech Śmigaj <w.smigaj@gmail.com> Co-authored-by: Travis Sluka <tsluka@ucar.edu> Co-authored-by: Guillaume Vernieres <guillaume.vernieres@noaa.gov> Co-authored-by: Yannick Trémolet <30638944+ytremolet@users.noreply.github.com> Co-authored-by: Benjamin Menetrier <30638301+benjaminmenetrier@users.noreply.github.com> Co-authored-by: Kriti Bhargava <kritib@ucar.edu> Co-authored-by: Hyun-Chul.Lee <Hyun-Chul.Lee@noaa.gov> Co-authored-by: Dom Heinzeller <dom.heinzeller@icloud.com>
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Description
Two options proposed to be added to
BkgErrorSoca:Issue(s) addressed
Testing
How were these changes tested? Only through the added ctest
What compilers / HPCs was it tested with? gnu only
Are the changes covered by ctests? (If not, tests should be added first.) Yes