Merged
Conversation
…asyconfigs into 20221122105031_new_pr_Clang1505
{compiler}[GCCcore/11.3.0] Clang v15.0.5 w/ Python 3.10.4
fix paths to perl modules in MAKER v3.01.04
add missing dependencies and fix incorrect ids in BRAKER v2.1.6
Add alternative checksum for MONAI 1.0.1
…2022a.eb and patches: LoRDEC-0.9_GATB.patch, LoRDEC-0.9_GraphVector.patch, GATB-Core-1.4.2_no-thirdparty-boost-hdf5.patch
{tools}[GCCcore/12.2.0] nano v7.2
{tools}[GCCcore/12.2.0] fio v3.34
…1.3.0.eb, SCIP-3.2.1-GCC-11.3.0.eb, GOBNILP-1.6.3-GCC-11.3.0.eb and patches: GOBNILP-1.6.3_use-eb-build-env.patch, LOP-3.2.1_standalone-scip-lop-build.patch
{bio}[gompi/2022a] LoRDEC v0.9, GATB-Core v1.4.2
…1101
{system}[GCCcore/11.3.0] libgcrypt v1.10.1
Eb python bundle
…e234
{bio}[GCC/12.2.0] Structure v2.3.4
install shared libraries for tesseract
{bio}[GCC/11.3.0,gompi/2022a] prokka v1.14.5, Bio-SearchIO-hmmer v1.7.3
{bio}[GCC/11.3.0] Subread v2.0.4
{bio}[gompi/2022a] Kraken2 v2.1.2
add tvem extension to R 4.2.1
{lib}[GCCcore/11.3.0] ruffus v2.8.4 w/ Python 3.10.4
{bio,numlib}[foss/2022a] phyx v1.3, Armadillo v11.4.3
use CUDA variant of OpenMM 7.5.1 as dependency for AlphaFold 2.3.0
…h1121 PyTorch-1.12.1-foss-2022a-CUDA-11.7.0 fix flaky test optim test
…ct510
{vis}[foss/2022a] R-tesseract v5.1.0
…1121 use patch to fix flaky test optim test in PyTorch 1.12.1 w/ foss/2022a
…1121 use patch to fix flaky test optim test in PyTorch 1.12.1 w/ foss/2021b
{bio}[foss/2022a] Casanovo v3.3.0 w/ Python 3.10.4
{bio}[foss/2022a] Casanovo v3.3.0 w/ Python 3.10.4 + CUDA 11.7.0
Create Python-bundle-3.10.4-foss-2022a.eb
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
20 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
No description provided.