add missing dependencies and add patch for fix incorrect ids for BRAKER v2.1.6

[lexming]

(created using eb --new-pr)

Changelog:

• add missing dependency on DIAMOND and CDBtools
• backport fix for Combined GeneMark and Augustus gtf conversion issues. Gaius-Augustus/BRAKER#354

[lexming]

@boegelbot: please test @ generoso

[boegelbot]

@lexming: Request for testing this PR well received on login1

PR test command 'EB_PR=17631 EB_ARGS= EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_17631 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

• exit code: 0
• output:

Submitted batch job 10568

Test results coming soon (I hope)...

Details

- notification for comment with ID 1491623249 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

[boegelbot]

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/517916d344b8c16713454835fb4d7778 for a full test report.

[lexming]

@boegelbot please test @ jsc-zen2

[boegelbot]

@lexming: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=17631 EB_ARGS= /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_17631 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

• exit code: 0
• output:

Submitted batch job 2430

Test results coming soon (I hope)...

Details

- notification for comment with ID 1491629993 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

[boegelbot]

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/boegelbot/24c975ada4ea60dda6e8f7ee410195de for a full test report.

[lexming]

@boegelbot please test @ jsc-zen2

[boegelbot]

@lexming: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=17631 EB_ARGS= /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_17631 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

• exit code: 0
• output:

Submitted batch job 2431

Test results coming soon (I hope)...

Details

- notification for comment with ID 1491658331 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

[boegelbot]

Test report by @boegelbot
SUCCESS
Build succeeded for 2 out of 2 (2 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/boegelbot/b6ce51eed378c6dc465188c9c4c9c7d9 for a full test report.

[branfosj]

Test report by @branfosj
SUCCESS
Build succeeded for 6 out of 6 (2 easyconfigs in total)
bear-pg0105u03a.bear.cluster - Linux RHEL 8.6, x86_64, Intel(R) Xeon(R) Platinum 8360Y CPU @ 2.40GHz (icelake), Python 3.6.8
See https://gist.github.com/branfosj/da1d6050ef293b1fffb44a2a83ade60e for a full test report.

[branfosj]

Going in, thanks @lexming!