Add AQM Regression Test and documentation for AQM & Update upp submodule to fix in-line post issues for RRFS and HAFS

[BrianCurtis-NOAA]

PR Checklist

• This PR is up-to-date with the top of all sub-component repositories except for those sub-components which are the subject of this PR. Please consult the ufs-weather-model wiki if you are unsure how to do this.

• This PR has been tested using a branch which is up-to-date with the top of all sub-component repositories except for those sub-components which are the subject of this PR

• An Issue describing the work contained in this PR has been created either in the subcomponent(s) or in the ufs-weather-model. The Issue should be created in the repository that is most relevant to the changes in contained in the PR. The Issue and the dependent sub-component PR
  are specified below.

• [] Results for one or more of the regression tests change and the reasons for the changes are understood and explained below.

• New or updated input data is required by this PR. If checked, please work with the code managers to update input data sets on all platforms.

Description

A regression test using the newest AQM subcomponent was created.
Documentation for using AQM in UFSWM is also included.

Issue(s) addressed

• fixes Add UFS-AQM regression test  #1099
• fixes Add UFS-AQM documentation #1098
• fixes Template files for tests consisting of different components othen those of the current coupled tests configuration #1258

Testing

How were these changes tested? What compilers / HPCs was it tested with? Are the changes covered by regression tests? (If not, why? Do new tests need to be added?) Have regression tests and unit tests (utests) been run? On which platforms and with which compilers? (Note that unit tests can only be run on tier-1 platforms)

• hera.intel
• hera.gnu
• orion.intel
• cheyenne.intel
• cheyenne.gnu
• gaea.intel
• jet.intel
• wcoss2.intel
• opnReqTest for newly added/changed feature
• [] CI (skipping)

Dependencies

NOAA-EMC/AQM/pull/4
NOAA-EMC/CMAQ/pull/1
NOAA-EMC/ufsatm/pull/558

Linked PR's

Closes #1286

[BrianCurtis-NOAA]

Automated RT Failure Notification
Machine: jet
Compiler: intel
Job: BL
[BL] Repo location: /lfs4/HFIP/h-nems/emc.nemspara/autort/pr/982694128/20220713194513/ufs-weather-model
Please make changes and add the following label back: jet-intel-BL

[BrianCurtis-NOAA]

Automated RT Failure Notification
Machine: gaea
Compiler: intel
Job: BL
[BL] Repo location: /lustre/f2/pdata/ncep/emc.nemspara/autort/pr/982694128/20220713183009/ufs-weather-model
[BL] Baseline creation and move successful
[RT] Repo location: /lustre/f2/pdata/ncep/emc.nemspara/autort/pr/982694128/20220713214030/ufs-weather-model
[RT] Error: Test compile_010 failed in run_compile failed
Please make changes and add the following label back: gaea-intel-BL

[BrianCurtis-NOAA]

ORT Passed in my previous PR: #1272 (comment)

[jkbk2004]

@DusanJovic-NOAA @ChunxiZhang-NOAA @DeniseWorthen All tests are done. With final reviews, we can move on to merge the PR.

[jkbk2004]

@BrianCurtis-NOAA can we start merging process of the dependencies?

[jkbk2004]

@WenMeng-NOAA all tests are done. we can start merging in fv3atm pr558.

[junwang-noaa]

@BrianCurtis-NOAA Thanks for brining the AQM documentation!

[WenMeng-NOAA]

Thanks!