✂️ ⚡ Rapid haploid variant calling and core genome alignment
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Updated
Oct 18, 2023 - Perl
✂️ ⚡ Rapid haploid variant calling and core genome alignment
Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model
A haplotype analysis toolkit for natural variation study.
The SSRG pipeline was created as a simple and focused tool to investigate genetic diversity between genomes.
A collection of scripts documenting the parameter settings used to apply variant discovery to the exploration of Duodenal Polyposis.
Pipeline which make phylogeny with sequence of different sample
Quickly identify and generate primers for diagnostic loci
Archive of personal scripts repository from my various projects in the Buell Lab at MSU (Jan. 2008 - Apr. 2011)
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