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Popular repositories

  1. WGP-Toolkit WGP-Toolkit Public

    Java tools based around the Picard API library.

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  2. GenomeResearch_2016_scripts GenomeResearch_2016_scripts Public

    Bash and Perl scripts associated with the research paper "Sister chromatid, but not NHEJ-mediated inter-chromosomal telomere fusions can occur independently of DNA ligases 3 and 4" (Genome Research…

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  3. simpleSnpCaller simpleSnpCaller Public

    Simple script for identifying single nucleotide variants with respect to reference. Output is complete list of all variants without filtering (beyond specifying minimum coverage depth) to provide a…

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  4. Genetic-Mechanisms-in-Duodenal-Polyposis Genetic-Mechanisms-in-Duodenal-Polyposis Public

    A collection of scripts documenting the parameter settings used to apply variant discovery to the exploration of Duodenal Polyposis.

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