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Code Table Request - new part name chrysalis #7627

Closed
4 of 8 tasks
Jegelewicz opened this issue Apr 3, 2024 · 5 comments
Closed
4 of 8 tasks

Code Table Request - new part name chrysalis #7627

Jegelewicz opened this issue Apr 3, 2024 · 5 comments
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Blocker This Issue is blocking other Issue(s). Please reference the issue this is blocking in the comments. CodeTableCleanup Our bad data leads to more bad data. Fix it! Function-CodeTables Priority-High (Needed for work) High because this is causing a delay in important collection work.. Technically Problematic
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@Jegelewicz
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Jegelewicz commented Apr 3, 2024

Goal

Describe what you're trying to accomplish. This is the only necessary step to start this process. The Committee is available to assist with all other steps. Please clearly indicate any uncertainty or desired guidance if you proceed beyond this step.

Clean up age class and create appropriate part name.

Context

Describe why this new value is necessary and existing values are not.

#7596 (comment)

Table

Code Tables are http://arctos.database.museum/info/ctDocumentation.cfm. Link to the specific table or value. This may involve multiple tables and will control datatype for Attributes. OtherID requests require BaseURL (and example) or explanation. Please ask for assistance if unsure.

https://arctos.database.museum/info/ctDocumentation.cfm?table=ctspecimen_part_name

Proposed Value

Proposed new value. This should be clear and compatible with similar values in the relevant table and across Arctos.

chrysalis

Proposed Definition

Clear, complete, non-collection-type-specific functional definition of the value. Avoid discipline-specific terminology if possible, include parenthetically if unavoidable.

An exoskeleton, a hard, smooth covering enveloping the insect inside as it transforms from a caterpillar to a butterfly, or the empty covering itself. | https://www.reconnectwithnature.org/news-events/the-buzz/what-s-the-difference-chrysalis-vs-cocoon/

Collection type

Some code tables contain collection-type-specific values. collection_cde may be found from https://arctos.database.museum/home.cfm

Ento

Attribute Extras

Attribute data type

If the request is for an attribute, what values will be allowed?
free-text, categorical, or number+units depending upon the attribute (TBA)

N/A

Attribute controlled values

If the values are categorical (to be controlled by a code table), add a link to the appropriate code table. If a new table or set of values is needed, please elaborate.

N/A

Attribute units

if numerical values should be accompanied by units, provide a link to the appropriate units table.

N/A

Part preservation attribute affect on "tissueness"

if a new part preservation is requested, please add the affect it would have on "tissueness": No Influence, Allows, or Denies

No Influence

Priority

Please describe the urgency and/or choose a priority-label to the right. You should expect a response within two working days, and may utilize Arctos Contacts if you feel response is lacking.

High, this is blocking #7596

Example Data

Requests with clarifying sample data are generally much easier to understand and prioritize. Please attach or link to any representative data, in any form or format, which might help clarify the request.

#7596

Available for Public View

Most data are by default publicly available. Describe any necessary access restrictions.

yes

Helpful Actions

  • Add the issue to the Code Table Management Project.

  • Please reach out to anyone who might be affected by this change. Leave a comment or add this to the Committee agenda if you believe more focused conversation is necessary.

@ArctosDB/arctos-code-table-administrators @DerekSikes can you provide a better definition?

Approval

All of the following must be checked before this may proceed.

The How-To Document should be followed. Pay particular attention to terminology (with emphasis on consistency) and documentation (with emphasis on functionality). No person should act in multiple roles; the submitter cannot also serve as a Code Table Administrator, for example.

  • Code Table Administrator[1] - check and initial, comment, or thumbs-up to indicate that the request complies with the how-to documentation and has your approval
  • Code Table Administrator[2] - check and initial, comment, or thumbs-up to indicate that the request complies with the how-to documentation and has your approval
  • DBA - The request is functionally acceptable. The term is not a functional duplicate, and is compatible with existing data and code.
  • DBA - Appropriate code or handlers are in place as necessary. (ID_References, Media Relationships, Encumbrances, etc. require particular attention)

Rejection

If you believe this request should not proceed, explain why here. Suggest any changes that would make the change acceptable, alternate (usually existing) paths to the same goals, etc.

  1. Can a suitable solution be found here? If not, proceed to (2)
  2. Can a suitable solution be found by Code Table Committee discussion? If not, proceed to (3)
  3. Take the discussion to a monthly Arctos Working Group meeting for final resolution.

Implementation

Once all of the Approval Checklist is appropriately checked and there are no Rejection comments, or in special circumstances by decree of the Arctos Working Group, the change may be made.

  • Review everything one last time. Ensure the How-To has been followed. Ensure all checks have been made by appropriate personnel.

  • Add or revise the code table term/definition as described above. Ensure the URL of this Issue is included in the definition. URLs should be included as text, separated by spaced pipes. Do not include HTML in definitions.

Close this Issue.

DO NOT modify Arctos Authorities in any way before all points in this Issue have been fully addressed; data loss may result.

Special Exemptions

In very specific cases and by prior approval of The Committee, the approval process may be skipped, and implementation requirements may be slightly altered. Please note here if you are proceeding under one of these use cases.

  1. Adding an existing term to additional collection types may proceed immediately and without discussion, but doing so may also subject users to future cleanup efforts. If time allows, please review the term and definition as part of this step.
  2. The Committee may grant special access on particular tables to particular users. This should be exercised with great caution only after several smooth test cases, and generally limited to "taxonomy-like" data such as International Commission on Stratigraphy terminology.
@Jegelewicz Jegelewicz added Priority-High (Needed for work) High because this is causing a delay in important collection work.. Function-CodeTables Blocker This Issue is blocking other Issue(s). Please reference the issue this is blocking in the comments. CodeTableCleanup Our bad data leads to more bad data. Fix it! labels Apr 3, 2024
@Jegelewicz Jegelewicz added this to the Needs Discussion milestone Apr 3, 2024
@dustymc
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dustymc commented Apr 3, 2024

See https://en.wikipedia.org/wiki/Pupa

The pupae of different groups of insects have different names such as chrysalis for the pupae of butterflies

Is this better as something like part=whole organism, life stage=https://arctos.database.museum/info/ctDocumentation.cfm?table=ctlife_stage#pupa, and age (or ????????) for the specialized term??

The linked thing suggests a chrysalis might be a thing but also seems far from authoritative.

??

@mkoo
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mkoo commented May 16, 2024

CT meeting 5/16:
We are going to add chrysalis and likewise cocoon. There seems to be structural, biological differences enough to warrant it. These will be removed from the age_class CT

@Jegelewicz
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This just needs DBA approval @dustymc

@dustymc
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dustymc commented May 23, 2024

I have an open question/concern (#7627 (comment)), and the recent AWG directive (https://docs.google.com/document/d/1mTWY6HRlC3TSrAb38W2HOQHiVO2F1tA1m5jaLstYMS8/edit#heading=h.w0tvdqpqd23q) suggests this probably should not exist even if my concerns can be addressed.

See also #7805 (comment), this is a far-ranging problem which has been discussed several times, I think always with conclusions which conflict with all previous (and future!) discussions, perhaps nobody should be doing anything else until we have clear direction, if not a formula.

@dustymc
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dustymc commented Aug 20, 2024

I believe this is a misplaced life stage (which can be refined in age). I am flagging as such and tabling. Someone please reopen and clarify if I'm just lost.

@dustymc dustymc closed this as completed Aug 20, 2024
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Blocker This Issue is blocking other Issue(s). Please reference the issue this is blocking in the comments. CodeTableCleanup Our bad data leads to more bad data. Fix it! Function-CodeTables Priority-High (Needed for work) High because this is causing a delay in important collection work.. Technically Problematic
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