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Code Table Request - REMOVE juvenal from the age class table #6858

Closed
6 of 8 tasks
Jegelewicz opened this issue Oct 19, 2023 · 18 comments
Closed
6 of 8 tasks

Code Table Request - REMOVE juvenal from the age class table #6858

Jegelewicz opened this issue Oct 19, 2023 · 18 comments
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CodeTableCleanup Our bad data leads to more bad data. Fix it! Priority-Normal (Not urgent) Normal because this needs to get done but not immediately.

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@Jegelewicz
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Jegelewicz commented Oct 19, 2023

Initial Request

Goal

Describe what you're trying to accomplish. This is the only necessary step to start this process. The Committee is available to assist with all other steps. Please clearly indicate any uncertainty or desired guidance if you proceed beyond this step.

clean up terms in the age class table to reflect life stages.

Context

Describe why this new value is no necessary.

"juvenal" is now very rare or obsolete in its original general sense and has become almost exclusively a technical term designating a specific plumage stage in birds.

It appears that "juvenal plumage" would be one method of determining that a bird is juvenile. I propose that we remove juvenal from the code table and for the records where it is used add the age class juvenile with juvenal in the method.

Table

Code Tables are http://arctos.database.museum/info/ctDocumentation.cfm. Link to the specific table or value. This may involve multiple tables and will control datatype for Attributes. OtherID requests require BaseURL (and example) or explanation. Please ask for assistance if unsure.

https://arctos.database.museum/info/ctDocumentation.cfm?table=ctage_class

Proposed Value to remove

juvenal

Definition of term to be removed

Clear, complete, non-collection-type-specific functional definition of the value. Avoid discipline-specific terminology if possible, include parenthetically if unavoidable.

Prior to molt into first basic plumage, or a bird in its first plumage after the downy plumage in the pullus stage. (Not equivalent to juvenile.)

Collection type

Some code tables contain collection-type-specific values. collection_cde may be found from https://arctos.database.museum/home.cfm

N/A

Attribute Extras

Attribute data type

If the request is for an attribute, what values will be allowed?
free-text, categorical, or number+units depending upon the attribute (TBA)

N/A

Attribute controlled values

If the values are categorical (to be controlled by a code table), add a link to the appropriate code table. If a new table or set of values is needed, please elaborate.

N/A

Attribute units

if numerical values should be accompanied by units, provide a link to the appropriate units table.

N/A

Part preservation attribute affect on "tissueness"

if a new part preservation is requested, please add the affect it would have on "tissueness": No Influence, Allows, or Denies

N/A

Priority

Please describe the urgency and/or choose a priority-label to the right. You should expect a response within two working days, and may utilize Arctos Contacts if you feel response is lacking.

Example Data

Requests with clarifying sample data are generally much easier to understand and prioritize. Please attach or link to any representative data, in any form or format, which might help clarify the request.

GUID_PREFIX AGE_CLASS NUMUSED
CSULB:Bird juvenal 1
DMNS:Bird juvenal 1
UAM:Bird juvenal 2
UMZM:Bird juvenal 2
UWYMV:Bird juvenal 1

Available for Public View

Most data are by default publicly available. Describe any necessary access restrictions.

N/A

Helpful Actions

  • Add the issue to the Code Table Management Project.

  • Please reach out to anyone who might be affected by this change. Leave a comment or add this to the Committee agenda if you believe more focused conversation is necessary.

@ArctosDB/arctos-code-table-administrators @acdoll @ewommack @adhornsby @ccicero

Approval

All of the following must be checked before this may proceed.

The How-To Document should be followed. Pay particular attention to terminology (with emphasis on consistency) and documentation (with emphasis on functionality). No person should act in multiple roles; the submitter cannot also serve as a Code Table Administrator, for example.

  • Code Table Administrator[1] - check and initial, comment, or thumbs-up to indicate that the request complies with the how-to documentation and has your approval
  • Code Table Administrator[2] - check and initial, comment, or thumbs-up to indicate that the request complies with the how-to documentation and has your approval
  • DBA - The request is functionally acceptable. The term is not a functional duplicate, and is compatible with existing data and code.
  • DBA - Appropriate code or handlers are in place as necessary. (ID_References, Media Relationships, Encumbrances, etc. require particular attention)

Rejection

If you believe this request should not proceed, explain why here. Suggest any changes that would make the change acceptable, alternate (usually existing) paths to the same goals, etc.

  1. Can a suitable solution be found here? If not, proceed to (2)
  2. Can a suitable solution be found by Code Table Committee discussion? If not, proceed to (3)
  3. Take the discussion to a monthly Arctos Working Group meeting for final resolution.

Implementation

Once all of the Approval Checklist is appropriately checked and there are no Rejection comments, or in special circumstances by decree of the Arctos Working Group, the change may be made.

  • Review everything one last time. Ensure the How-To has been followed. Ensure all checks have been made by appropriate personnel.

  • Add or revise the code table term/definition as described above. Ensure the URL of this Issue is included in the definition. URLs should be included as text, separated by spaced pipes. Do not include HTML in definitions.

Close this Issue.

DO NOT modify Arctos Authorities in any way before all points in this Issue have been fully addressed; data loss may result.

Special Exemptions

In very specific cases and by prior approval of The Committee, the approval process may be skipped, and implementation requirements may be slightly altered. Please note here if you are proceeding under one of these use cases.

  1. Adding an existing term to additional collection types may proceed immediately and without discussion, but doing so may also subject users to future cleanup efforts. If time allows, please review the term and definition as part of this step.
  2. The Committee may grant special access on particular tables to particular users. This should be exercised with great caution only after several smooth test cases, and generally limited to "taxonomy-like" data such as International Commission on Stratigraphy terminology.
@Jegelewicz Jegelewicz added Priority-Normal (Not urgent) Normal because this needs to get done but not immediately. Function-CodeTables CodeTableCleanup Our bad data leads to more bad data. Fix it! labels Oct 19, 2023
@Jegelewicz Jegelewicz added this to the Needs Discussion milestone Oct 19, 2023
@mkoo
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mkoo commented Oct 20, 2023

It seems with a term that is obsolete and with such low usage in Arctos that this request is easily justified.
Have these collections been contacted yet? if so, I'd check a box for this

@Jegelewicz
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Have these collections been contacted yet?

I tagged those that I could above.

@Jegelewicz
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I changed the CSULB record.

@Nicole-Ridgwell-NMMNHS
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This seems like a good cleanup to me, but I'll wait for some of the bird collections to chime in before I check a box.

@acdoll
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acdoll commented Oct 26, 2023

Ours has been changed to juvenile.

@Nicole-Ridgwell-NMMNHS
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checking a box

@adhornsby
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UMZM records have been changed to juvenile.

@Nicole-Ridgwell-NMMNHS
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Just UAM and UWYMV left?

@Jegelewicz
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@ArctosDB/arctos-code-table-administrators have made the effort to reach collections using this term there are less than 5 uses of the term and we propose that @dustymc changes those to juvenile with juvenal in the method.

@dustymc
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dustymc commented Mar 8, 2024

@mkoo please advise

data

temp_juvenal.csv

summary


 guid_prefix | count 
-------------+-------
 UWYMV:Bird  |     1
 UMZM:Bird   |     1
 UAM:Bird    |     2
(3 rows)

contact

@adhornsby
@ewommack

@Jegelewicz
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Beth and Angela,

Please provide feedback in this issue so that we can change data and close it.

Thanks!

Teresa J. Mayfield-Meyer

@Jegelewicz
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I do not know who to contact for UAM:Bird, but this is getting a little ridiculous.....

@ewommack
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ewommack commented Mar 22, 2024

Corrected the UWYMV record, sorry for the delay.

I do not know who to contact for UAM:Bird, but this is getting a little ridiculous.....

Maybe try Kevin Winker? @ccicero - any ideas who is working in UAM bird collection?

@adhornsby
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Sorry about that, thought I had corrected all UMZM already. Done now!

@Jegelewicz
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@mkoo @dustymc can we make some sort of usage rule?

@dustymc
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dustymc commented May 23, 2024

make some sort of usage rule?

Please! Here's a starting point: 1% of Arctos records.

See also #7627 (comment)

@Jegelewicz
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@mkoo we should have looked at this one today...

@dustymc
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dustymc commented Aug 27, 2024

@dustymc dustymc closed this as completed Aug 27, 2024
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CodeTableCleanup Our bad data leads to more bad data. Fix it! Priority-Normal (Not urgent) Normal because this needs to get done but not immediately.
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