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[ROCm][DeepSeek-V3.2][Perf] Enable gluon preshuffle indexer (block_size=64 + SHUFFLE layout)#41008

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[ROCm][DeepSeek-V3.2][Perf] Enable gluon preshuffle indexer (block_size=64 + SHUFFLE layout)#41008
frida-andersson wants to merge 4 commits intovllm-project:mainfrom
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@frida-andersson frida-andersson commented Apr 27, 2026

[ROCm][DeepSeek-V3.2][Perf] Enable gluon preshuffle indexer (block_size=64 + SHUFFLE layout)

Purpose

Switch the ROCm sparse MLA decode path from the two-kernel deepgemm_fp8_paged_mqa_logits_stage1 + reduce_sum flow to the fused deepgemm_fp8_paged_mqa_logits ("gluon") API with Preshuffle=True and KVBlockSize=64. This eliminates the stage1+reduce pair and several auxiliary ops, cutting the sparse indexer kernel time by ~51%.

Based on the gluon preshuffle work by @ganyi1996ppo in #32649 (rebased by @whx-sjtu). Incorporates the +256 logits padding fix from @maeehart (#40643). Supersedes #40643.

Changes

  • KV cache block size 1 → 64 on ROCm in both DeepseekV32IndexerBackend and ROCMAiterMLASparseBackend.
  • KV cache layout NHD → SHUFFLE in the Triton indexer_k_quant_and_cache and cp_gather_indexer_k_quant_cache kernels, required by the gluon preshuffle kernel.
  • Fused gluon dispatch via deepgemm_fp8_paged_mqa_logits with Preshuffle=True, KVBlockSize=64. Falls back to stage1 + reduce_sum when block_size == 1 or on older AITER versions.
  • Cached logits buffer (_get_paged_logits_buffer) with +256 column padding (credit @maeehart, #40643) to absorb preshuffle kernel OOB writes. Eliminates per-layer torch.full allocation. Companion aiter fix: ROCm/aiter#2866.
  • actual_max_seq_len passed to paged MQA logits instead of max_model_len, shrinking the GEMM problem size.
  • FP8 KV cache support in the sparse MLA backend (fp8_e4m3, fp8_e5m2, fp8_e4m3fnuz, fp8_e5m2fnuz).
  • HIP graph replay fix — fresh output tensor per call instead of cached buffer, preventing "Write access to a read-only page" faults.
  • Small-heads guard — warning + PyTorch fallback when heads < 16.

Files: indexer.py (1 line), ops/rocm_aiter_mla_sparse.py, backends/mla/rocm_aiter_mla_sparse.py — 3 files, ~150 lines net.

Test Result

Performance

Single profiled decode step, 1K input / 100 output, TP4, 4× MI355X.

Before (stage1 + reduce_kernel, 14.2 µs + reduce):
Screenshot 2026-04-27 at 14 43 27
After (gluon preshuffle, 4.9 µs):
Screenshot 2026-04-27 at 14 43 51

Kernel Baseline This PR Delta
Sparse indexer total 1,127 µs 557 µs -51%
reduce_kernel<float,sum> 453 µs 0 µs eliminated
FillFunctor 667 µs 274 µs -59%
Config Iteration time Delta
Upstream baseline (block_size=1, stage1) 22.0 ms
This PR (block_size=64, SHUFFLE, preshuffle) 20.5 ms -6.6%

Accuracy (GSM8K 5-shot, exact_match, TP4)

Config Score ±
Upstream baseline (block_size=1, stage1) 0.9424 0.0065
This PR (block_size=64, SHUFFLE, preshuffle) 0.9409 0.0065

Test Plan

  • GSM8K eval at TP4 with FP8 KV cache
  • Verify no memory access faults with HIP graphs enabled
  • Verify CUDA paths unchanged (ROCm-only code paths)

Dependencies

  • AITER ≥ v0.1.11 — requires deepgemm_fp8_paged_mqa_logits with Preshuffle kwarg (added in ROCm/aiter#1754). Falls back to stage1 + reduce_sum on older versions.
  • ROCm ≥ 7.0 (tested on 7.2.2 with HIP 7.2.53211)

Related PRs

  • #32649 (@ganyi1996ppo, @whx-sjtu) — original gluon preshuffle implementation. This PR rebases onto current main and extends it.
  • #40643 (@maeehart) — superseded. Incorporates +256 padding fix; maeehart added as collaborator.
  • ROCm/aiter#2866 — companion aiter fix: adds mask=offset < max_model_len to preshuffle kernel buffer_store sites.
Co-authored-by: ganyi <ygan@amd.com>
Co-authored-by: whx-sjtu <xiaowang990929@gmail.com>
Co-authored-by: Markus Hartikainen <maeehart@users.noreply.github.com>

frida-andersson and others added 3 commits April 27, 2026 08:03
…ze=64 + SHUFFLE layout)

Based on vllm-project#32649 by @ganyi1996ppo — rebased onto
current main with structural adaptations.

Switch the ROCm sparse MLA backend from the stage1+reduce indexer path
to the gluon preshuffle kernel (deepgemm_fp8_paged_mqa_logits with
Preshuffle=True, KVBlockSize=64). This replaces a two-kernel pipeline
(deepgemm_fp8_paged_mqa_logits_stage1 + reduce<float,sum>) with a
single fused Triton kernel, yielding ~1 ms savings per decode iteration
on MI355X TP4 at 1K context.

Key changes:
- ROCMAiterMLASparseBackend now inherits from AiterMLABackend to reuse
  FP8 KV cache infrastructure (dtype support, prefill path, metadata)
- ROCMAiterMLASparseImpl inherits from AiterMLAImpl; forward_mqa
  overridden for sparse decode via mla_decode_fwd with topk indices
- Added FP8 casting + q_scale/k_scale passing in _forward_sparse_mla
- KV cache flattened for mla_decode_fwd when block_size > 1
- Triton indexer kernels use SHUFFLE layout (was NHD)
- rocm_fp8_paged_mqa_logits uses gluon API when block_size > 1,
  falls back to stage1 otherwise
- DeepseekV32IndexerBackend returns block_size=64 (was 1 on ROCm)
- Parent-allocated oversized buffers released in metadata builder
  __init__ to save ~52 MB/layer

Profiled result (1K input / 100 output, TP4 MI355X):
  Baseline: 21.9 ms/iter → Gluon: 18.2 ms/iter
  (includes run-to-run noise; conservative estimate ~1.5-2.0 ms real)

Accuracy (GSM8K 5-shot): 0.9121 vs 0.9424 baseline — 3pp regression
under investigation (likely FP8 scale handling or layout numerics).

Signed-off-by: frida-andersson <fanderss@amd.com>
Allocate output tensor freshly each call instead of caching in
_sparse_decode_out. The cached buffer was captured as read-only
during HIP graph recording, causing "Write access to a read-only
page" faults on replay.

Also move current_platform import to module level.

Made-with: Cursor
…cleanup

Add defensive +256 column padding to _get_paged_logits_buffer to absorb
OOB writes from the AITER preshuffle kernel (up to ~190 elements past
context_length). Re-fill the cached buffer with -inf on every cache hit
to prevent stale logits from prior steps corrupting top-k selection.
This fixes a ~5pp GSM8K accuracy regression (0.89 → 0.94).

Also: fix ruff I001 import ordering, move fp8_dtype inside FP8 branch.

Co-authored-by: Markus Hartikainen <maeehart@users.noreply.github.com>
Made-with: Cursor
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@mergify mergify Bot added deepseek Related to DeepSeek models rocm Related to AMD ROCm labels Apr 27, 2026
@mergify mergify Bot added the v1 label Apr 27, 2026
@github-project-automation github-project-automation Bot moved this to Todo in AMD Apr 27, 2026
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Code Review

This pull request updates the ROCM Aiter MLA sparse attention backend to support FP8 data types and larger block sizes (specifically block size 64). Key changes include the introduction of a paged logits buffer to prevent out-of-bounds writes, support for the 'SHUFFLE' layout in quantization and gather kernels, and integration with the new AITER paged MQA logits API. Feedback highlights critical issues regarding CUDA Graph compatibility due to dynamic sequence length usage, potential layout mismatches when block sizes are not 64, and a hardcoded device string that could cause failures in multi-GPU setups.

decode_metadata.block_table,
decode_metadata.schedule_metadata,
max_model_len=max_model_len,
max_model_len=actual_max_seq_len,
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critical

Using actual_max_seq_len (which is the dynamic maximum sequence length of the current batch) as the max_model_len parameter is incompatible with CUDA Graphs. Since this value is a Python integer and changes every step, it will be baked into the graph during capture. Subsequent replays with a different actual maximum sequence length will use the stale value, leading to incorrect GEMM dimensions or memory corruption. You should use the constant max_model_len passed as an argument to the function to ensure graph stability.

Suggested change
max_model_len=actual_max_seq_len,
max_model_len=max_model_len,

num_tokens,
head_dim,
"NHD",
"SHUFFLE",
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high

The quantization kernel is now hardcoded to use the "SHUFFLE" layout. However, the attention logic in rocm_fp8_paged_mqa_logits only enables Preshuffle=True when block_size == 64 (line 408) and falls back to the stage1 kernel for block_size == 1 (line 413). The stage1 kernel and the gluon kernel with Preshuffle=False expect the standard "NHD" layout. This inconsistency will lead to incorrect results for any block_size other than 64. The layout should be conditional on the block size.

Suggested change
"SHUFFLE",
"SHUFFLE" if block_size == 64 else "NHD",

k_cache_value.stride(0),
k_cache_scale.stride(0),
"NHD",
"SHUFFLE",
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high

Similar to the indexer quantization kernel, this gather kernel should only use the "SHUFFLE" layout when the block size is 64 to maintain compatibility with the attention kernels and the fallback paths.

Suggested change
"SHUFFLE",
"SHUFFLE" if block_size == 64 else "NHD",

out_qk = torch.full(
(heads, batch_size * next_n, max_model_len),
float("-inf"),
device="cuda",
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high

Hardcoding device="cuda" can cause runtime errors in multi-GPU environments or if the input tensors are on a specific device that is not the current default. It is safer to use the device of the input query tensor.

Suggested change
device="cuda",
device=q_fp8.device,

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