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fetchpatch: Sort/filter patch by filenames.#1

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vcunat merged 1 commit intovcunat:p/fetchpatchfrom
aszlig:fetchpatch-sort
May 13, 2014
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fetchpatch: Sort/filter patch by filenames.#1
vcunat merged 1 commit intovcunat:p/fetchpatchfrom
aszlig:fetchpatch-sort

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@aszlig aszlig commented May 13, 2014

This not only sorts the patch but also filters out duplicate files, currently all uses of fetchpatch lead to the same hashes so they're already sorted.

This not only sorts the patch but also filters out duplicate files,
currently all uses of fetchpatch lead to the same hashes so they're
already sorted.

Signed-off-by: aszlig <aszlig@redmoonstudios.org>
vcunat added a commit that referenced this pull request May 13, 2014
fetchpatch: Sort/filter patch by filenames.
@vcunat vcunat merged commit 3307155 into vcunat:p/fetchpatch May 13, 2014
@aszlig aszlig deleted the fetchpatch-sort branch May 13, 2014 19:36
vcunat pushed a commit that referenced this pull request Sep 6, 2014
vcunat pushed a commit that referenced this pull request Jan 20, 2015
Fix the sha256 for PyBrowserID
vcunat pushed a commit that referenced this pull request Feb 4, 2015
different wording for adminPubkey description
vcunat pushed a commit that referenced this pull request Mar 22, 2015
clang-3.6: provide path to gcc on Linux
vcunat pushed a commit that referenced this pull request Jan 8, 2016
This hopefully fixes intermittent test failures like

  http://hydra.nixos.org/build/29962437

  router# [  240.128835] INFO: task mke2fs:99 blocked for more than 120 seconds.
  router# [  240.130135]       Not tainted 3.18.25 #1-NixOS
  router# [  240.131110] "echo 0 > /proc/sys/kernel/hung_task_timeout_secs" disables this message.

assuming that these are caused by high load on the host.
vcunat pushed a commit that referenced this pull request Jan 8, 2016
This hopefully fixes intermittent test failures like

  http://hydra.nixos.org/build/29962437

  router# [  240.128835] INFO: task mke2fs:99 blocked for more than 120 seconds.
  router# [  240.130135]       Not tainted 3.18.25 #1-NixOS
  router# [  240.131110] "echo 0 > /proc/sys/kernel/hung_task_timeout_secs" disables this message.

assuming that these are caused by high load on the host.

(cherry picked from commit 6d02d7e)
vcunat pushed a commit that referenced this pull request Jan 18, 2016
vcunat pushed a commit that referenced this pull request Jan 1, 2018
kde-applications: 17.08.3 -> 17.12.0
vcunat pushed a commit that referenced this pull request Feb 18, 2018
nixos/k8s: Enable Node authorizer and NodeRestriction by default
vcunat pushed a commit that referenced this pull request Jun 21, 2018
vcunat pushed a commit that referenced this pull request Aug 28, 2018
vcunat pushed a commit that referenced this pull request Jul 10, 2019
The sed expression actually caused an error on hydra:
```
sed: -e expression #1, char 18: Invalid collation character
```
It seems to build fine without it however.
vcunat pushed a commit that referenced this pull request Jul 21, 2019
vcunat pushed a commit that referenced this pull request Mar 31, 2022
This effectively fixes the majority of all VM tests which were broken
because `/dev/vda` (or any other block device) wasn't mountable:

      machine # mounting /dev/vda on /...
      machine # mount: mounting /dev/vda on /mnt-root/ failed: No such device[    2.820976] Kernel panic - not syncing: Attempted to kill init! exitcode=0x00000100
      machine # [    2.821757] CPU: 0 PID: 1 Comm: init Not tainted 5.10.72 #1-NixOS
      machine # [    2.821757] Hardware name: QEMU Standard PC (i440FX + PIIX, 1996), BIOS rel-1.14.0-0-g155821a1990b-prebuilt.qemu.org 04/01/2014
      machine # [    2.821757] Call Trace:
      machine # [    2.821757]  dump_stack+0x6b/0x83
      machine # [    2.821757]  panic+0x101/0x2c8
      machine # [    2.821757]  do_exit.cold+0x14/0xb3
      machine # [    2.821757]  do_group_exit+0x33/0xa0
      machine # [    2.821757]  __x64_sys_exit_group+0x14/0x20
      machine # [    2.821757]  do_syscall_64+0x33/0x40
      machine # [    2.821757]  entry_SYSCALL_64_after_hwframe+0x44/0xa9
      machine # [    2.821757] RIP: 0033:0x7f67ec2800f6
      machine # [    2.821757] Code: 00 4c 8b 0d 2c 5d 11 00 eb 19 66 2e 0f 1f 84 00 00 00 00 00 89 d7 89 f0 0f 05 48 3d 00 f0 ff ff 77 22 f4 89 d7 44 89 c0 0f 05 <48> 3d 00 f0 ff ff 76 e2 f7 d8 64 41 89 01 eb da 66 2e 0f 1f 84 00
      machine # [    2.821757] RSP: 002b:00007fff8f5a71d8 EFLAGS: 00000202 ORIG_RAX: 00000000000000e7
      machine # [    2.821757] RAX: ffffffffffffffda RBX: 0000000000699704 RCX: 00007f67ec2800f6
      machine # [    2.821757] RDX: 0000000000000001 RSI: 000000000000003c RDI: 0000000000000001
      machine # [    2.821757] RBP: 0000000000000004 R08: 00000000000000e7 R09: ffffffffffffff80
      machine # [    2.821757] R10: 00007f67ec33f3e0 R11: 0000000000000202 R12: 000000000000000b
      machine # [    2.821757] R13: 00007fff8f5a75a8 R14: 0000000000000000 R15: 00000000004fc198
      machine # [    2.821757] Kernel Offset: 0x31e00000 from 0xffffffff81000000 (relocation range: 0xffffffff80000000-0xffffffffbfffffff)
      machine # [    2.821757] Rebooting in 1 seconds..

This happened because the kernel failed to load modules such as `ext4`
from `boot.initrd.availableKernelModules`[1] on e.g. a `mount(2)` syscall.

The problem is that `kmod` isn't linked against `libpthread.so.0`
anymore because it got merged into `libc.so.6` (however, the .so still
exists), but still needs it:

      machine # newfstatat(AT_FDCWD, "/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-glibc-2.34-36/lib/x86_64", 0x7ffd951114c0, 0) = -1 ENOENT (No such file or directory)
      machine # openat(AT_FDCWD, "/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-glibc-2.34-36/lib/x86_64/libpthread.so.0", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
      machine # newfstatat(AT_FDCWD, "/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-glibc-2.34-36/lib/x86_64", 0x7ffd951114c0, 0) = -1 ENOENT (No such file or directory)
      machine # openat(AT_FDCWD, "/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-glibc-2.34-36/lib/libpthread.so.0", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
      machine # newfstatat(AT_FDCWD, "/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-glibc-2.34-36/lib", 0x7ffd951114c0, 0) = -1 ENOENT (No such file or directory)
      machine # openat(AT_FDCWD, "/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-glibc-2.34-36/etc/ld.so.cache", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory)
      machine # writev(2, [{iov_base="/nix/store/kdc9n48ksdc1a8y8w512w"..., iov_len=69}, {iov_base=": ", iov_len=2}, {iov_base="error while loading shared libra"..., iov_len=36}, {iov_base=": ", iov_len=2}, {iov_base="libpthread.so.0", iov_len=15}, {iov_base=": ", iov_len=2}, {iov_base="cy
      machine # ) = 184
      machine # exit_group(127)                         = ?
      machine # +++ exited with 127 +++
      machine # mount: mounting /dev/vda on /mnt-root/ failed: No such device
      machine # [   19.167180] Kernel panic - not syncing: Attempted to kill init! exitcode=0x00000100
      machine # [   19.167711] CPU: 0 PID: 1 Comm: init Not tainted 5.10.72 #1-NixOS

This is not a problem

* inside stage-1 because `LD_LIBRARY_PATH` points to `$out/lib` of
  extra-utils where `libpthread.so.6` also exists.
* on a running system because `${pkgs.glibc}/lib` is part of kmod's
  rpath.

However this is a problem inside the kernel which calls `modprobe` (in
our case `kmod`) to load modules and doesn't know about
`LD_LIBRARY_PATH`. Also, the rpath-reference was nuked.

To work around this, the kernel's `modprobe`
(i.e. `/proc/sys/kernel/modprobe`) now points to a wrapper which
explicitly declares `LD_LIBRARY_PATH`. We can't use `makeWrapper` here
because `modprobe` itself must not be renamed. Otherwise, `kmod` (which
is the link-target of `modprobe`) won't work because it expects
`argv[0] == "modprobe"` to perform modprobe's tasks.

[1] https://nixos.org/manual/nixos/stable/options.html#opt-boot.initrd.availableKernelModules
vcunat pushed a commit that referenced this pull request Aug 24, 2022
SQLAlchemy-Utils v0.36.6 package override build is failing.

This is due to a patch in the original SQLAlchemy-Utils package which
broke the build of this package override:

```bash
> applying patch /nix/store/pd6anhwbf0in3r3jhi3sbn5v2fjs0mf2-skip-database-tests.patch
> patching file conftest.py
> Hunk #1 FAILED at 61.
> Hunk #2 succeeded at 98 (offset -10 lines).
```

These SQLAlchemy package overrides were originaly added to fix
incompatibilities with Flask-Admin.

See commit 05ae01f

However with Flask-Admin >= v1.5.6, several SQLAlchemy compatibility patches were added:
* https://flask-admin.readthedocs.io/en/latest/changelog/

We can now safely remove these package overrides to make bukuserver work again.
vcunat pushed a commit that referenced this pull request Sep 28, 2022
This reverts commit 246216e.

3.9.1 does not compile due to patch collision:

       > applying patch /nix/store/sickncxw0s730j6gfrnlsi5ndgysi6la-libxml2-cmake-find-package.patch
       > patching file CMakeLists.txt
       > Hunk #1 FAILED at 42.

Fixing it is not trivial as upstream started bundling libxml2:
  NixOS#182941 (comment)

Let's revert the update for now.
vcunat pushed a commit that referenced this pull request Jan 11, 2023
Without this change it segfaults when trying to play any media:

  $ jellyfinmediaplayer
  Warning: Ignoring XDG_SESSION_TYPE=wayland on Gnome. Use QT_QPA_PLATFORM=wayland to run on Wayland anyway.
  libpng warning: iCCP: known incorrect sRGB profile
  Logging to /home/bf/.local/share/jellyfinmediaplayer/logs/jellyfinmediaplayer.log
  Cannot load libcuda.so.1
  Segmentation fault (core dumped)

The backtrace shows pipewire being at fault:

  $ coredumpctl debug
  [...]
  Program terminated with signal SIGSEGV, Segmentation fault.
  #0  0x00007f711428c9bb in core_event_demarshal_remove_id () from /nix/store/nhffrd7f15dhfbkwzgayq7hhzmdvdy19-pipewire-0.3.63-lib/lib/pipewire-0.3/libpipewire-module-protocol-native.so
  [Current thread is 1 (Thread 0x7f6ffdc87640 (LWP 1360949))]
  (gdb) bt
  #0  0x00007f711428c9bb in core_event_demarshal_remove_id () from /nix/store/nhffrd7f15dhfbkwzgayq7hhzmdvdy19-pipewire-0.3.63-lib/lib/pipewire-0.3/libpipewire-module-protocol-native.so
  #1  0x00007f711428886c in process_remote () from /nix/store/nhffrd7f15dhfbkwzgayq7hhzmdvdy19-pipewire-0.3.63-lib/lib/pipewire-0.3/libpipewire-module-protocol-native.so
  #2  0x00007f7114288e68 in on_remote_data () from /nix/store/nhffrd7f15dhfbkwzgayq7hhzmdvdy19-pipewire-0.3.63-lib/lib/pipewire-0.3/libpipewire-module-protocol-native.so
  NixOS#3  0x00007f7114310efe in loop_iterate () from /nix/store/nhffrd7f15dhfbkwzgayq7hhzmdvdy19-pipewire-0.3.63-lib/lib/spa-0.2/support/libspa-support.so
  NixOS#4  0x00007f71266fe7f2 in do_loop () from /nix/store/nhffrd7f15dhfbkwzgayq7hhzmdvdy19-pipewire-0.3.63-lib/lib/libpipewire-0.3.so.0
  NixOS#5  0x00007f7128b08e86 in start_thread () from /nix/store/ayfr5l52xkqqjn3n4h9jfacgnchz1z7s-glibc-2.35-224/lib/libc.so.6
  NixOS#6  0x00007f7128b8fce0 in clone3 () from /nix/store/ayfr5l52xkqqjn3n4h9jfacgnchz1z7s-glibc-2.35-224/lib/libc.so.6
  (gdb)

Standalone mpv doesn't segfault (when directly playing the underlying
media files). I don't know why.

Fixes: b97cda7 ("mpv-unwrapped: 0.34.1 -> 0.35.0")

Fixes NixOS#205141

Ref jellyfin/jellyfin-desktop#341

(cherry picked from commit 3c528bc)
vcunat pushed a commit that referenced this pull request Aug 4, 2023
Pull in _FORTIFY_SOURCE=3 stack smashing fix. Without the change on
current `master` `rtorrent` crashes at start as:

*** buffer overflow detected ***: terminated
                                                                                        __pthread_kill_implementation (threadid=<optimized out>, signo=signo@entry=6, no_tid=no_tid@entry=0) at pthread_kill.c:44
44      pthread_kill.c: No such file or directory.
(gdb) bt
    #0  __pthread_kill_implementation (threadid=<optimized out>, signo=signo@entry=6, no_tid=no_tid@entry=0) at pthread_kill.c:44
    #1  0x00007ffff7880af3 in __pthread_kill_internal (signo=6, threadid=<optimized out>) at pthread_kill.c:78
    #2  0x00007ffff7831c86 in __GI_raise (sig=sig@entry=6) at ../sysdeps/posix/raise.c:26
    NixOS#3  0x00007ffff781b8ba in __GI_abort () at abort.c:79
    NixOS#4  0x00007ffff781c5f5 in __libc_message (fmt=fmt@entry=0x7ffff7992540 "*** %s ***: terminated\n") at ../sysdeps/posix/libc_fatal.c:150
    NixOS#5  0x00007ffff7910679 in __GI___fortify_fail (msg=msg@entry=0x7ffff79924e6 "buffer overflow detected") at fortify_fail.c:24
    NixOS#6  0x00007ffff790eea4 in __GI___chk_fail () at chk_fail.c:28
    NixOS#7  0x00007ffff790ea85 in ___snprintf_chk (s=<optimized out>, maxlen=<optimized out>, flag=<optimized out>, slen=<optimized out>, format=<optimized out>) at snprintf_chk.c:29
    NixOS#8  0x0000000000472acf in utils::Lockfile::try_lock() ()
    NixOS#9  0x000000000044b524 in core::DownloadStore::enable(bool) ()
    NixOS#10 0x00000000004b1f7b in Control::initialize() ()
    NixOS#11 0x000000000043000b in main ()
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