v0.11.0
0.11.0 (2024-02-27)
Features
- add build of docker containers (#243) (c455e25)
- adding "seqvars aggregate" command (#211) (#214) (d6db0b7)
- adjust "strucvars query" to read ingested VCFs (#202) (#220) (1fb3c58)
- allow importing gnomAD SV/CNV v4 as background db (#295) (#310) (ce9b391)
- create .tbi for written .vcf.gz files (#233) (#241) (be99642)
- implement "seqvars ingest" command (#199) (#206) (21b965c)
- implement "seqvars query" command (#201) (#223) (a7cb0bd)
- implement "strucvars ingest" command (#200) (#208) (a783ef3)
- implement I/O from/to S3 (#234) (#242) (414bb5d)
- implement ingest and aggregate for sniffles2 (#296) (#312) (6432365)
- implement ingest for Clair3+GLNexus (#297) (#311) (4144003)
- implement parsing of clinvar-data-jsonl data (#198) (#204) (e0ea7ac)
- implementing "seqvars prefilter" (#209) (#213) (984dc8b)
- remove gene regions from "strucvars query" database enhancement (#221) (#222) (28663b6)
- transform "db mk-inhouse" to "strucvars aggregate" (#212) (#217) (b51f027)
- transform "db to-bin" to "strucvars txt-to-bin" (#218) (#219) (ea6e387)
- unify database names in strucvar filtration (#307) (#308) (43413d4)
- write out fileDate on ingest (#210) (#215) (7731958)