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Transform strucvars "db mk-inhouse" to "strucvars aggregate" #212

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holtgrewe opened this issue Oct 9, 2023 · 0 comments · Fixed by #217
Closed

Transform strucvars "db mk-inhouse" to "strucvars aggregate" #212

holtgrewe opened this issue Oct 9, 2023 · 0 comments · Fixed by #217
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enhancement New feature or request
Milestone
v0.11.0

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@holtgrewe
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Is your feature request related to a problem? Please describe.
The command uses the old file formats and structures.

Describe the solution you'd like
Create a new command "strucvars aggregate" that works similarly, but uses the new ingested strucvars VCF files.

Describe alternatives you've considered
N/A

Additional context
N/A
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enhancement New feature or request
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v0.11.0
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feat: transform "db mk-inhouse" to "strucvars aggregate" (#212) varfish-org/varfish-server-worker
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@holtgrewe