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perf: Use samtools collate in fastq separate wrapper #2960

Merged
merged 3 commits into from
May 28, 2024
Merged

perf: Use samtools collate in fastq separate wrapper #2960

merged 3 commits into from
May 28, 2024

Commits on May 28, 2024

  1. Update wrapper.py

    @fxwiegand
    fxwiegand authored May 28, 2024
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  2. Update Snakefile

    @fxwiegand
    fxwiegand authored May 28, 2024
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  3. Remove tmpdir usage 

    -T is not required when -O is used
    @fxwiegand
    fxwiegand authored May 28, 2024
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