Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Remove FixBAMFile.jar after one/two releases #972

Closed
magicDGS opened this issue Aug 21, 2017 · 0 comments
Closed

Remove FixBAMFile.jar after one/two releases #972

magicDGS opened this issue Aug 21, 2017 · 0 comments

Comments

@magicDGS
Copy link
Member

After #947, the FixBAMFile class was deprecated. This deprecation will be included in the following release, and the class should be removed after one/two releases to allow dependent code to be changed (if any).

Current release is 2.11.0
@magicDGS magicDGS mentioned this issue Oct 28, 2018
Merged
5 tasks
lbergelson pushed a commit that referenced this issue Nov 5, 2018
@magicDGS @lbergelson
Delete long-term deprecated code (#1213)
1e6454b 
* Deleting deprecated classes SAMTools and FixBAMFile without replacement.
  These classes are command line tools that do not belong in htsjdk.  
* Closes #955
* Closes #972
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@magicDGS