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add setup_job_directory shortcut #98

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add setup_job_directory shortcut #98

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baa1e62
add setup_job_directory shortcut
JackTemaki Aug 31, 2022
cfb1df8
Merge branch 'master' into nick_add_shortcut
curufinwe May 17, 2023
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16 changes: 16 additions & 0 deletions sisyphus/shortcuts.py
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Original file line number Diff line number Diff line change
Expand Up @@ -89,6 +89,15 @@ def add_subparsers(parsers):
help='All config files that will be loaded')
parser_remove_job_and_descendants.set_defaults(func=remove_job_and_descendants)

parser_setup_job_directory = sc_subparsers.add_parser(
"setup_job_directory",
help="setup a job that is marked as runnable manually"
)
parser_setup_job_directory.add_argument("--job", help="job path")
parser_setup_job_directory.add_argument('argv', metavar='ARGV', type=str, nargs='*',
help='All config files that will be loaded')
parser_setup_job_directory.set_defaults(func=setup_job_directory)

parser_show_jobs_in_webserver = sc_subparsers.add_parser(
'show_jobs_in_webserver',
help="Start webserver which shows all given jobs")
Expand Down Expand Up @@ -188,6 +197,13 @@ def remove_job_and_descendants(args):
call_sis(call)


def setup_job_directory(args):
for conf_file in args.argv:
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Does passing all config files at once cause problems?

call = ['console', conf_file, '--script', '-c',
'tk.setup_job_directory(tk.sis_graph.find("%s")[0])' % (args.job)]
call_sis(call)


def show_job_in_webserver(args):
call = ['console', '--script']
for job in args.job:
Expand Down