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    14 repositories

    • ShinyJWAS

      Public
      ShinyJWAS: Shiny-based application to help perform whole-genome Bayesian regression analysis with JWAS package
      R
      •
      GNU General Public License v2.0
      •3•2•0•3•Updated Jan 9, 2024Jan 9, 2024

    • MixedModelsforAgriculturalScience

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Nov 3, 2023Nov 3, 2023

    • SSNNMM

      Public
      This is a repository containing codes used in the paper "Interpreting single-step genomic evaluation as a neural network of three layers: pedigree, genotypes, and phenotypes"
      Julia
      •
      MIT License
      •1•0•0•0•Updated May 1, 2023May 1, 2023

    • multi-class-Bayesian-Alphabet

      Public
      This is a repository containing codes used in the paper "Single-trait and Multiple-trait Genomic Prediction from Multi-class Bayesian Alphabet Models using Biological Information".
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Sep 13, 2021Sep 13, 2021

    • LMMonBoard

      Public
      This is a repository containing codes for LMMonBoard, an interactive web app to teach linear mixed models.
      Python
      •2•1•0•0•Updated Jul 13, 2021Jul 13, 2021

    • NN-Bayes

      Public
      This is a repository containing codes used in the paper "Interpretable Artificial Neural Networks incorporating Bayesian Alphabet Models for Genome-wide Prediction and Association Studies".
      Julia
      •3•0•0•0•Updated Jun 22, 2021Jun 22, 2021

    • scripts

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •2•0•1•0•Updated Jan 8, 2021Jan 8, 2021

    • Distribution_of_LD

      Public
      This is a repository containing codes used in the paper "Exact Distribution of Linkage Disequilibrium in the Presence of Mutation, Selection or Minor Allele Frequency Filtering".
      Julia
      •1•0•0•0•Updated Nov 19, 2020Nov 19, 2020

    • Plots

      Public
      R
      •
      MIT License
      •1•0•0•0•Updated Nov 5, 2020Nov 5, 2020

    • CardGame

      Public
      playing a card game with quantitative genetics
      MIT License
      •0•0•0•0•Updated Sep 1, 2020Sep 1, 2020

    • project_template

      Public
      Shell
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Aug 26, 2020Aug 26, 2020

    • BayesXII

      Public
      This is a repository containing codes used in the paper "Fast parallelized sampling of Bayesian regression models for whole-genome prediction".
      Julia
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated May 20, 2020May 20, 2020

    • Linear-Models-for-the-Prediction-of-Animal-Breeding-Values

      Public
      Jupyter Notebook
      •2•1•0•0•Updated Aug 16, 2019Aug 16, 2019

    • SSBR.jl

      Public
      single-step Bayesian regression analyses
      Julia
      •
      GNU General Public License v2.0
      •2•0•0•0•Updated Aug 18, 2016Aug 18, 2016