Code

bump samtools#6648

Code

Merged

sateeshperi merged 15 commits intonf-core:masternf-core/modules:masterfrom matthdsm:bump/samtoolsmatthdsm/nf-core-modules:bump/samtoolsCopy head branch name to clipboardSep 18, 2024

+1,110-841

Commits

Commits on Sep 16, 2024

• bump samtools

  matthdsm

  committed
  f586690

• samtools cat no longer supports

  matthdsm

  committed
  f1e7e18

• update snapshots

  matthdsm

  committed
  67f59cd

• more snapshots

  matthdsm

  committed
  bf74887

• Merge branch 'master' into bump/samtools

  matthdsm

  authored
  26194f1

• fix consensus test

  matthdsm

  committed
  ac022cf

• Merge branch 'master' into bump/samtools

  matthdsm

  authored
  bc346bf

Commits on Sep 17, 2024

• another attempt at fixing 'consensus'

  matthdsm

  committed
  6e11747

• reheader > nf-test

  matthdsm

  committed
  9e7a2f7

• markdup > nf-test

  matthdsm

  committed
  52289ad

• Merge branch 'master' into bump/samtools

  matthdsm

  authored
  6d5d64b

• fix linting for markdup

  matthdsm

  committed
  9039974

• consensus fix?

  matthdsm

  committed
  464b67c

• fix consensus

  matthdsm

  committed
  16cc5b2

Commits on Sep 18, 2024

• Merge branch 'master' into bump/samtools

  sateeshperi

  authored
  76be585