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Liftover config rename
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ncherric committed Aug 25, 2023
1 parent f49ac23 commit b4d0edb
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2 changes: 1 addition & 1 deletion workflow/liftoverTo37_Snakefile
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ include: "rules/common.smk"

rule all:
input:
expand("data/liftover/{version}/liftedOver.{name}.vcf", name=NAMES, version=config['Liftover']['desiredVersion']),
expand("data/liftover/{version}/liftedOver.{name}.vcf", name=NAMES, version=config['LiftoverSub']['desiredVersion']),

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2 changes: 1 addition & 1 deletion workflow/liftoverTo38_Snakefile
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ include: "rules/common.smk"

rule all:
input:
expand("data/liftover/{version}/liftedOver.{name}.vcf", name=NAMES, version=config['Liftover']['desiredVersion'])
expand("data/liftover/{version}/liftedOver.{name}.vcf", name=NAMES, version=config['LiftoverSub']['desiredVersion'])

##### Modules #####

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