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@monarch-initiative

Monarch Initiative

Cross-species disease discovery and diagnosis

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  1. mondo mondo Public template

    Mondo Disease Ontology

    Jupyter Notebook 239 54

  2. koza koza Public

    Data transformation framework for LinkML data models

    Python 48 4

  3. MAxO MAxO Public

    Medical action ontology

    HTML 54 4

  4. helpdesk helpdesk Public

    The Monarch Initiative Helpdesk

    7

  5. monarch-ingest monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    Python 15 2

  6. monarch-app monarch-app Public

    Monarch Initiative website and API

    Python 19 6

Repositories

Showing 10 of 240 repositories
  • mondo Public template

    Mondo Disease Ontology

    monarch-initiative/mondo’s past year of commit activity
    Jupyter Notebook 239 CC-BY-4.0 54 429 (2 issues need help) 39 Updated Jan 17, 2025
  • mondo-ingest Public

    Coordinating the mondo-ingest with external sources

    monarch-initiative/mondo-ingest’s past year of commit activity
    Jupyter Notebook 6 3 228 (1 issue needs help) 22 Updated Jan 17, 2025
  • monarch-app Public

    Monarch Initiative website and API

    monarch-initiative/monarch-app’s past year of commit activity
    Python 19 BSD-3-Clause 6 189 (3 issues need help) 9 Updated Jan 17, 2025
  • pheval Public

    A framework for empirical evaluation of phenotype matching and prioritisation

    monarch-initiative/pheval’s past year of commit activity
    Python 12 Apache-2.0 2 28 4 Updated Jan 16, 2025
  • monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    monarch-initiative/monarch-ingest’s past year of commit activity
    Python 15 2 32 3 Updated Jan 16, 2025
  • closurizer Public

    Add closure expansion fields to kgx files following the Golr pattern

    monarch-initiative/closurizer’s past year of commit activity
    Python 4 0 1 0 Updated Jan 16, 2025
  • curategpt Public

    LLM-driven curation assist tool

    monarch-initiative/curategpt’s past year of commit activity
    Jupyter Notebook 74 BSD-3-Clause 12 30 4 Updated Jan 16, 2025
  • phenio Public

    An integrated ontology for Phenomics

    monarch-initiative/phenio’s past year of commit activity
    Makefile 6 BSD-3-Clause 0 19 1 Updated Jan 16, 2025
  • rppr_stats Public
    monarch-initiative/rppr_stats’s past year of commit activity
    Makefile 0 0 0 0 Updated Jan 16, 2025
  • pheval-paper Public
    monarch-initiative/pheval-paper’s past year of commit activity
    Makefile 0 0 0 0 Updated Jan 16, 2025
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