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102 followers · 69 following

Achievements

Achievement: QuickdrawAchievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx3Achievement: Starstruckx2Achievement: Arctic Code Vault Contributor

Achievements

Achievement: QuickdrawAchievement: Pair ExtraordinaireAchievement: YOLOAchievement: Pull Sharkx3Achievement: Starstruckx2Achievement: Arctic Code Vault Contributor

Organizations

@monarch-initiative @UCLA-BD2K @bioenergy-research-centers

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caufieldjh/README.md

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  1. awesome-bioie awesome-bioie Public

    🧫 A curated list of resources relevant to doing Biomedical Information Extraction (including BioNLP)

    350 33

  2. monarch-initiative/ontogpt monarch-initiative/ontogpt Public

    LLM-based ontological extraction tools, including SPIRES

    Jupyter Notebook 612 78

  3. Knowledge-Graph-Hub/kg-obo Knowledge-Graph-Hub/kg-obo Public

    A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub

    Python 32 2

  4. monarch-initiative/curategpt monarch-initiative/curategpt Public

    LLM-driven curation assist tool

    Jupyter Notebook 70 12

  5. ncbo/BioPortal-to-KGX ncbo/BioPortal-to-KGX Public

    Assemble a BioPortal Knowledge Graph

    Python 4 1

  6. Knowledge-Graph-Hub/kg-phenio Knowledge-Graph-Hub/kg-phenio Public

    A graph for accessing and comparing knowledge concerning phenotypes across species and genetic backgrounds.

    Python 5 4