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@emilyncosta emilyncosta released this 30 Apr 17:19
· 142 commits to main since this release
7470ec5
Finishing touches to the workflow by Davi (#1)

* Add a task file

* [Suggestion] Add stubs to process (#2)

* adding stubs to all modules

* creating a bash script to generate mock data

* adding stub_params and renaming mock data

* changes following PR review

* fixing typo on stub_params

* adding last touches as requested on PR comments

* [Suggestion] README with DAG file (#3)

* adding stubs to all modules

* creating a bash script to generate mock data

* adding stub_params and renaming mock data

* changes following PR review

* fixing typo on stub_params

* adding last touches as requested on PR comments

* adding dag.dot and dag.png as resource to use later

* Updating README

* fixing typo on pipeline name

* removing dag.dot

* accepting modifications from pull request #3

* [Suggestion] Updating config files for Compute environments (#4)

* adding stubs to all modules

* creating a bash script to generate mock data

* adding stub_params and renaming mock data

* changes following PR review

* fixing typo on stub_params

* adding last touches as requested on PR comments

* adding dag.dot and dag.png as resource to use later

* Adding process configuration to nextflow.config profile

* creating a standard profile and removing directives from modules

* scratching profiles

* renoving uncicler from google life science profile

* removing configs from main and adding to folder

* adding aws, gcp and azure configurations

* adding aws access and secret key

* changing nextflow.config

* Changing azure profile name

* using includeConfig to create profiles

* removing dag.dot

* adding local and standard profiles with process settings

* removing local profile and fixing typo

* [Suggestion] README with DAG file (#3)

* adding stubs to all modules

* creating a bash script to generate mock data

* adding stub_params and renaming mock data

* changes following PR review

* fixing typo on stub_params

* adding last touches as requested on PR comments

* adding dag.dot and dag.png as resource to use later

* Updating README

* fixing typo on pipeline name

* removing dag.dot

* accepting modifications from pull request #3

* adding dag.dot and dag.png as resource to use later

* Revert commits

This reverts commit 14c4a96bea33bace100843d7398ef48643125da8.

* Tweak readme

* Further tweaks

* Update the version

Co-authored-by: Mxrcon <[email protected]>