publish the orthoani result separately

emilyncosta · Jun 11, 2021 · 310d6b6 · 310d6b6
1 parent ec45317
commit 310d6b6
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Showing 2 changed files with 2 additions and 1 deletion.
diff --git a/main.nf b/main.nf
@@ -84,7 +84,7 @@ workflow COMPUTE_SIMILARITY_WF {
 
     ORTHOANI(params.blastplus_dir, params.orthoani_jar, orthoani_ch)
 
-    UTILS_REFINE_ORTHOANI_RESULT(ORTHOANI.out)
+    UTILS_REFINE_ORTHOANI_RESULT(ORTHOANI.out[0])
 
     UTILS_COMBINE_ORTHOANI_RESULTS_TSV(
         UTILS_REFINE_ORTHOANI_RESULT.collect()

diff --git a/modules/orthoani/orthoani.nf b/modules/orthoani/orthoani.nf
@@ -17,6 +17,7 @@ process ORTHOANI {
     tuple path(fasta1), path(fasta2)
 
     output:
+    path('*result.txt')
     path('*txt')
-Original file line number
+Diff line change
@@ Expand Up / @@ -17,6 +17,7 @@ process ORTHOANI { @@
         tuple path(fasta1), path(fasta2)
         output:
+        path('*result.txt')
         path('*txt')
@@ Expand Down @@