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{bio}[intel/2017a] BUSCO 1.22 (REVIEW) #5120

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Merged
boegel merged 2 commits into from
Sep 20, 2017
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{bio}[intel/2017a] BUSCO 1.22 (REVIEW) #5120

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{bio}[intel/2017a] BUSCO 1.22 (REVIEW)
Sep 15, 2017
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Sep 17, 2017
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35 changes: 35 additions & 0 deletions easybuild/easyconfigs/b/BUSCO/BUSCO-1.22-intel-2017a-Python-2.7.13.eb
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Original file line number Diff line number Diff line change
@@ -0,0 +1,35 @@
easyblock = 'Tarball'

name = 'BUSCO'
version = '1.22'
versionsuffix = '-Python-%(pyver)s'

homepage = 'http://busco.ezlab.org/'
description = "BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs"

toolchain = {'name': 'intel', 'version': '2017a'}


@boegel boegel Sep 15, 2017

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drop duplicate empty line please

@hajgato hajgato Sep 17, 2017

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@boegel done

source_urls = ['http://busco.ezlab.org/v1/files/']
sources = ['%(name)s_v%(version)s.tar.gz']

checksums = ['86088bbd2128ea04ad9e1b2ebd18201f4c79a48a161ba2593feb12abb8a2d0e2']

dependencies = [
('Python', '2.7.13'),
('BLAST+', '2.6.0', versionsuffix),
('HMMER', '3.1b2'),
('AUGUSTUS', '3.2.3', versionsuffix),
('EMBOSS', '6.6.0', '-X11-20170314'),
]

postinstallcmds = ['chmod +x %(installdir)s/*.py']

sanity_check_paths = {
'files': ['BUSCO_v1.22.py'],

@boegel boegel Sep 15, 2017

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@hajgato please use %(version)s rather than hardcoding the version?

@hajgato hajgato Sep 17, 2017

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@boegel done

'dirs': ['sample_data'],
}

modextrapaths = {'PATH': '.'}

@boegel boegel Sep 15, 2017

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no need to use '.', '' works fine

@hajgato hajgato Sep 17, 2017

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@boegel done


moduleclass = 'bio'