{bio}[foss/2024a] BioEmu v1.2.0

[lexming]

(created using eb --new-pr)

Depends on:

• {lib}[foss/2024a] PyTorch-Geometric v2.6.1 #24947
• {bio}[foss/2024a] ColabFold v1.5.5 #25471

[github-actions]

Updated software mygene-3.2.2-foss-2024a.eb

Diff against mygene-3.2.2-foss-2023a.eb

easybuild/easyconfigs/m/mygene/mygene-3.2.2-foss-2023a.eb

diff --git a/easybuild/easyconfigs/m/mygene/mygene-3.2.2-foss-2023a.eb b/easybuild/easyconfigs/m/mygene/mygene-3.2.2-foss-2024a.eb
index 6b579b9059..feccccc7bb 100644
--- a/easybuild/easyconfigs/m/mygene/mygene-3.2.2-foss-2023a.eb
+++ b/easybuild/easyconfigs/m/mygene/mygene-3.2.2-foss-2024a.eb
@@ -10,12 +10,11 @@ version = '3.2.2'
 homepage = 'https://github.com/biothings/mygene.py'
 description = "Python Client for MyGene.Info services."
 
-toolchain = {'name': 'foss', 'version': '2023a'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 
 dependencies = [
-    ('Python', '3.11.3'),
-    ('Python-bundle-PyPI', '2023.06'),
-    ('SciPy-bundle', '2023.07'),
+    ('Python', '3.12.3'),
+    ('SciPy-bundle', '2024.05'),
 ]
 
 exts_list = [

Diff against mygene-3.2.2-foss-2022b.eb

easybuild/easyconfigs/m/mygene/mygene-3.2.2-foss-2022b.eb

diff --git a/easybuild/easyconfigs/m/mygene/mygene-3.2.2-foss-2022b.eb b/easybuild/easyconfigs/m/mygene/mygene-3.2.2-foss-2024a.eb
index 526e6a1cd9..feccccc7bb 100644
--- a/easybuild/easyconfigs/m/mygene/mygene-3.2.2-foss-2022b.eb
+++ b/easybuild/easyconfigs/m/mygene/mygene-3.2.2-foss-2024a.eb
@@ -1,5 +1,7 @@
 # Author: Pavel Grochal (INUITS)
+# Update: Pavel Tománek (INUITS)
 # License: GPLv2
+
 easyblock = 'PythonBundle'
 
 name = 'mygene'
@@ -8,11 +10,11 @@ version = '3.2.2'
 homepage = 'https://github.com/biothings/mygene.py'
 description = "Python Client for MyGene.Info services."
 
-toolchain = {'name': 'foss', 'version': '2022b'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 
 dependencies = [
-    ('Python', '3.10.8'),
-    ('SciPy-bundle', '2023.02'),
+    ('Python', '3.12.3'),
+    ('SciPy-bundle', '2024.05'),
 ]
 
 exts_list = [

Diff against mygene-3.2.2-foss-2022a.eb

easybuild/easyconfigs/m/mygene/mygene-3.2.2-foss-2022a.eb

diff --git a/easybuild/easyconfigs/m/mygene/mygene-3.2.2-foss-2022a.eb b/easybuild/easyconfigs/m/mygene/mygene-3.2.2-foss-2024a.eb
index 9d29434361..feccccc7bb 100644
--- a/easybuild/easyconfigs/m/mygene/mygene-3.2.2-foss-2022a.eb
+++ b/easybuild/easyconfigs/m/mygene/mygene-3.2.2-foss-2024a.eb
@@ -1,5 +1,7 @@
 # Author: Pavel Grochal (INUITS)
+# Update: Pavel Tománek (INUITS)
 # License: GPLv2
+
 easyblock = 'PythonBundle'
 
 name = 'mygene'
@@ -8,16 +10,16 @@ version = '3.2.2'
 homepage = 'https://github.com/biothings/mygene.py'
 description = "Python Client for MyGene.Info services."
 
-toolchain = {'name': 'foss', 'version': '2022a'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 
 dependencies = [
-    ('Python', '3.10.4'),
-    ('SciPy-bundle', '2022.05'),
+    ('Python', '3.12.3'),
+    ('SciPy-bundle', '2024.05'),
 ]
 
 exts_list = [
-    ('biothings_client', '0.2.6', {
-        'checksums': ['84d9d577b8fb3963a2fa71c5a13b10411566f3bc2e8ba67bb15de9d2ced08c2d'],
+    ('biothings_client', '0.3.1', {
+        'checksums': ['c972bf2e02b6f9cc78f7f2fbc5ef02cc56fe4f8a2adcb8801ec902f4ab7011e6'],
     }),
     (name, version, {
         'checksums': ['e729cabbc28cf5afb221bca1ab637883b375cb1a3e2f067587ec79f71affdaea'],