{lib}[foss/2024a] PyTorch-Geometric v2.6.1 #24947

lexming · 2025-12-21T10:22:09Z

(created using eb --new-pr)

Depends on:

…: PyTorch-Geometric-2.6.1_relax-tolerance-test-message-passing.patch

github-actions · 2025-12-21T10:22:36Z

Updated software `PyTorch-Geometric-2.6.1-foss-2024a.eb`

Diff against PyTorch-Geometric-2.5.0-foss-2023a-PyTorch-2.1.2.eb

easybuild/easyconfigs/p/PyTorch-Geometric/PyTorch-Geometric-2.5.0-foss-2023a-PyTorch-2.1.2.eb

diff --git a/easybuild/easyconfigs/p/PyTorch-Geometric/PyTorch-Geometric-2.5.0-foss-2023a-PyTorch-2.1.2.eb b/easybuild/easyconfigs/p/PyTorch-Geometric/PyTorch-Geometric-2.6.1-foss-2024a.eb
index 8a6f54e1a2..0d91e900b1 100644
--- a/easybuild/easyconfigs/p/PyTorch-Geometric/PyTorch-Geometric-2.5.0-foss-2023a-PyTorch-2.1.2.eb
+++ b/easybuild/easyconfigs/p/PyTorch-Geometric/PyTorch-Geometric-2.6.1-foss-2024a.eb
@@ -1,46 +1,35 @@
 easyblock = 'PythonBundle'
 
 name = 'PyTorch-Geometric'
-version = '2.5.0'
-local_pytorchver = '2.1.2'
-versionsuffix = '-PyTorch-%s' % local_pytorchver
+version = '2.6.1'
 
 homepage = 'https://github.com/rusty1s/pytorch_geometric'
 description = "PyTorch Geometric (PyG) is a geometric deep learning extension library for PyTorch."
 
-toolchain = {'name': 'foss', 'version': '2023a'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 
 builddependencies = [
-    ('PDM', '2.12.4'),
-    ('Parallel-Hashmap', '1.3.12'),  # header only
+    ('Parallel-Hashmap', '2.0.0'),
 ]
 
 dependencies = [
-    ('Python', '3.11.3'),
-    ('PyTorch', local_pytorchver),
-    ('scikit-learn', '1.3.1'),
-    ('scikit-image', '0.22.0'),
-    ('numba', '0.58.1'),
-    ('h5py', '3.9.0'),
-    ('tqdm', '4.66.1'),
+    ('Python', '3.12.3'),
+    ('PyTorch-bundle', '2.6.0'),
+    ('PyTorch-Lightning', '2.5.2'),
+    ('aiohttp', '3.10.10'),
+    ('tqdm', '4.66.5'),
+    ('ASE', '3.23.0'),
+    ('graphviz-python', '0.21'),
+    ('h5py', '3.12.1'),
+    ('numba', '0.60.0'),
     ('RDFlib', '7.0.0'),
-    ('ASE', '3.22.1'),
+    ('RDKit', '2025.03.3'),
+    ('scikit-learn', '1.5.2'),
+    ('scikit-image', '0.25.0'),
     ('YACS', '0.1.8'),
-    ('aiohttp', '3.8.5'),
 ]
 
 exts_list = [
-    ('googledrivedownloader', '0.4', {
-        'modulename': 'google_drive_downloader',
-        'checksums': ['4b34c1337b2ff3bf2bd7581818efbdcaea7d50ffd484ccf80809688f5ca0e204'],
-    }),
-    ('plyfile', '1.0.3', {
-        'patches': ['plyfile-1.0.3_use_pdm_backend.patch'],
-        'checksums': [
-            {'plyfile-1.0.3.tar.gz': '0ecbe8e7ce55a7bbc6c9dea24242fffa0ab7d9bed33fbd5ad567ca013bcc5222'},
-            {'plyfile-1.0.3_use_pdm_backend.patch': '815611863f16e785ef03a7992a0b99e433150212ff03559c7f6fce4e86d9e0a7'},
-        ],
-    }),
     ('torch_scatter', '2.1.2', {
         'source_urls': ['https://github.com/rusty1s/pytorch_scatter/archive/refs/tags/'],
         'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
@@ -59,7 +48,10 @@ exts_list = [
         'source_urls': ['https://github.com/rusty1s/pytorch_cluster/archive/refs/tags/'],
         'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
         'checksums': ['0e2b08095e03cf87ce9b23b7a7352236a25d3ed92d92351dc020fd927ea8dbfe'],
-        'runtest': 'pytest',
+        'runtest': (
+            'pytest'
+            ' -k "not test_nearest[dtype0-device0]" '  # scipy.cluster.vq does not support float16, skip this param
+        ),
         'testinstall': True,
     }),
     ('torch_spline_conv', '1.2.2', {
@@ -69,14 +61,15 @@ exts_list = [
         'runtest': 'pytest',
         'testinstall': True,
     }),
-    ('python-louvain', '0.16', {
-        'modulename': 'community.community_louvain',
-        'checksums': ['b7ba2df5002fd28d3ee789a49532baad11fe648e4f2117cf0798e7520a1da56b'],
-    }),
     ('torch_geometric', version, {
         'source_urls': ['https://github.com/pyg-team/pytorch_geometric/archive/refs/tags/'],
         'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
-        'checksums': ['f9abf00dc7fd1039ef1d9734a0fbd8c52196e39ca9fc4816afd98a8f311265be'],
+        'patches': ['PyTorch-Geometric-2.6.1_relax-tolerance-test-message-passing.patch'],
+        'checksums': [
+            {'torch_geometric-2.6.1.tar.gz': 'd0f1ced0bfc66fa187544332b21076d0ceedf4b989276cc220a8a857bdf0ae69'},
+            {'PyTorch-Geometric-2.6.1_relax-tolerance-test-message-passing.patch':
+             '9e3d5b477ee84fb7e1ce67370b195b2a1fe51a65238f37d4db649e47127fead8'},
+        ],
         'runtest': (
             'pytest'
             ' --ignore=test/test_edge_index.py'  # many tests require PyTorch with MKL
@@ -87,7 +80,13 @@ exts_list = [
             ' --ignore=test/test_inspector.py'  # test failing due to typing change
             ' --ignore=test/nn/conv/test_hetero_conv.py'  # unknown jit compilation issue
             ' --ignore=test/nn/conv/test_sage_conv.py'  # unknown jit compilation issue
-            ' -k "not test_multithreading_neighbor_loader" '  # picky about number of cores in the environment
+            ' --ignore=test/graphgym/test_graphgym.py'  # torch-lightning can fail on site specific Slurm environment
+            ' -k "'
+            'not test_multithreading_neighbor_loader '  # picky about number of cores in the environment
+            # these tests feed all torch_geometric.datasets into a hydra config store
+            # new datasets in v2.6.1 (OPF) have incompatible types with omegaconf
+            'and not test_fill_config_store and not test_hydra_config_store '
+            '"'
         ),
         'testinstall': True,
     }),

Diff against PyTorch-Geometric-2.5.0-foss-2023a-PyTorch-2.1.2-CUDA-12.1.1.eb

easybuild/easyconfigs/p/PyTorch-Geometric/PyTorch-Geometric-2.5.0-foss-2023a-PyTorch-2.1.2-CUDA-12.1.1.eb

diff --git a/easybuild/easyconfigs/p/PyTorch-Geometric/PyTorch-Geometric-2.5.0-foss-2023a-PyTorch-2.1.2-CUDA-12.1.1.eb b/easybuild/easyconfigs/p/PyTorch-Geometric/PyTorch-Geometric-2.6.1-foss-2024a.eb
index 05da9522c2..0d91e900b1 100644
--- a/easybuild/easyconfigs/p/PyTorch-Geometric/PyTorch-Geometric-2.5.0-foss-2023a-PyTorch-2.1.2-CUDA-12.1.1.eb
+++ b/easybuild/easyconfigs/p/PyTorch-Geometric/PyTorch-Geometric-2.6.1-foss-2024a.eb
@@ -1,47 +1,35 @@
 easyblock = 'PythonBundle'
 
 name = 'PyTorch-Geometric'
-version = '2.5.0'
-local_pytorchver = '2.1.2'
-versionsuffix = '-PyTorch-%s-CUDA-%%(cudaver)s' % local_pytorchver
+version = '2.6.1'
 
 homepage = 'https://github.com/rusty1s/pytorch_geometric'
 description = "PyTorch Geometric (PyG) is a geometric deep learning extension library for PyTorch."
 
-toolchain = {'name': 'foss', 'version': '2023a'}
+toolchain = {'name': 'foss', 'version': '2024a'}
 
 builddependencies = [
-    ('PDM', '2.12.4'),
-    ('Parallel-Hashmap', '1.3.12'),  # header only
+    ('Parallel-Hashmap', '2.0.0'),
 ]
 
 dependencies = [
-    ('Python', '3.11.3'),
-    ('CUDA', '12.1.1', '', SYSTEM),
-    ('PyTorch', local_pytorchver, '-CUDA-%(cudaver)s'),
-    ('scikit-learn', '1.3.1'),
-    ('scikit-image', '0.22.0'),
-    ('numba', '0.58.1'),
-    ('h5py', '3.9.0'),
-    ('tqdm', '4.66.1'),
+    ('Python', '3.12.3'),
+    ('PyTorch-bundle', '2.6.0'),
+    ('PyTorch-Lightning', '2.5.2'),
+    ('aiohttp', '3.10.10'),
+    ('tqdm', '4.66.5'),
+    ('ASE', '3.23.0'),
+    ('graphviz-python', '0.21'),
+    ('h5py', '3.12.1'),
+    ('numba', '0.60.0'),
     ('RDFlib', '7.0.0'),
-    ('ASE', '3.22.1'),
+    ('RDKit', '2025.03.3'),
+    ('scikit-learn', '1.5.2'),
+    ('scikit-image', '0.25.0'),
     ('YACS', '0.1.8'),
-    ('aiohttp', '3.8.5'),
 ]
 
 exts_list = [
-    ('googledrivedownloader', '0.4', {
-        'modulename': 'google_drive_downloader',
-        'checksums': ['4b34c1337b2ff3bf2bd7581818efbdcaea7d50ffd484ccf80809688f5ca0e204'],
-    }),
-    ('plyfile', '1.0.3', {
-        'patches': ['plyfile-1.0.3_use_pdm_backend.patch'],
-        'checksums': [
-            {'plyfile-1.0.3.tar.gz': '0ecbe8e7ce55a7bbc6c9dea24242fffa0ab7d9bed33fbd5ad567ca013bcc5222'},
-            {'plyfile-1.0.3_use_pdm_backend.patch': '815611863f16e785ef03a7992a0b99e433150212ff03559c7f6fce4e86d9e0a7'},
-        ],
-    }),
     ('torch_scatter', '2.1.2', {
         'source_urls': ['https://github.com/rusty1s/pytorch_scatter/archive/refs/tags/'],
         'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
@@ -60,7 +48,10 @@ exts_list = [
         'source_urls': ['https://github.com/rusty1s/pytorch_cluster/archive/refs/tags/'],
         'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
         'checksums': ['0e2b08095e03cf87ce9b23b7a7352236a25d3ed92d92351dc020fd927ea8dbfe'],
-        'runtest': 'pytest',
+        'runtest': (
+            'pytest'
+            ' -k "not test_nearest[dtype0-device0]" '  # scipy.cluster.vq does not support float16, skip this param
+        ),
         'testinstall': True,
     }),
     ('torch_spline_conv', '1.2.2', {
@@ -70,14 +61,15 @@ exts_list = [
         'runtest': 'pytest',
         'testinstall': True,
     }),
-    ('python-louvain', '0.16', {
-        'modulename': 'community.community_louvain',
-        'checksums': ['b7ba2df5002fd28d3ee789a49532baad11fe648e4f2117cf0798e7520a1da56b'],
-    }),
     ('torch_geometric', version, {
         'source_urls': ['https://github.com/pyg-team/pytorch_geometric/archive/refs/tags/'],
         'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
-        'checksums': ['f9abf00dc7fd1039ef1d9734a0fbd8c52196e39ca9fc4816afd98a8f311265be'],
+        'patches': ['PyTorch-Geometric-2.6.1_relax-tolerance-test-message-passing.patch'],
+        'checksums': [
+            {'torch_geometric-2.6.1.tar.gz': 'd0f1ced0bfc66fa187544332b21076d0ceedf4b989276cc220a8a857bdf0ae69'},
+            {'PyTorch-Geometric-2.6.1_relax-tolerance-test-message-passing.patch':
+             '9e3d5b477ee84fb7e1ce67370b195b2a1fe51a65238f37d4db649e47127fead8'},
+        ],
         'runtest': (
             'pytest'
             ' --ignore=test/test_edge_index.py'  # many tests require PyTorch with MKL
@@ -88,7 +80,13 @@ exts_list = [
             ' --ignore=test/test_inspector.py'  # test failing due to typing change
             ' --ignore=test/nn/conv/test_hetero_conv.py'  # unknown jit compilation issue
             ' --ignore=test/nn/conv/test_sage_conv.py'  # unknown jit compilation issue
-            ' -k "not test_multithreading_neighbor_loader" '  # picky about number of cores in the environment
+            ' --ignore=test/graphgym/test_graphgym.py'  # torch-lightning can fail on site specific Slurm environment
+            ' -k "'
+            'not test_multithreading_neighbor_loader '  # picky about number of cores in the environment
+            # these tests feed all torch_geometric.datasets into a hydra config store
+            # new datasets in v2.6.1 (OPF) have incompatible types with omegaconf
+            'and not test_fill_config_store and not test_hydra_config_store '
+            '"'
         ),
         'testinstall': True,
     }),

Diff against PyTorch-Geometric-2.1.0-foss-2022a-PyTorch-1.12.0.eb

easybuild/easyconfigs/p/PyTorch-Geometric/PyTorch-Geometric-2.1.0-foss-2022a-PyTorch-1.12.0.eb

diff --git a/easybuild/easyconfigs/p/PyTorch-Geometric/PyTorch-Geometric-2.1.0-foss-2022a-PyTorch-1.12.0.eb b/easybuild/easyconfigs/p/PyTorch-Geometric/PyTorch-Geometric-2.6.1-foss-2024a.eb
index aa337c7b4d..0d91e900b1 100644
--- a/easybuild/easyconfigs/p/PyTorch-Geometric/PyTorch-Geometric-2.1.0-foss-2022a-PyTorch-1.12.0.eb
+++ b/easybuild/easyconfigs/p/PyTorch-Geometric/PyTorch-Geometric-2.6.1-foss-2024a.eb
@@ -1,54 +1,94 @@
 easyblock = 'PythonBundle'
 
 name = 'PyTorch-Geometric'
-version = '2.1.0'
-local_pytorchver = '1.12.0'
-versionsuffix = '-PyTorch-%s' % local_pytorchver
+version = '2.6.1'
 
 homepage = 'https://github.com/rusty1s/pytorch_geometric'
 description = "PyTorch Geometric (PyG) is a geometric deep learning extension library for PyTorch."
 
-toolchain = {'name': 'foss', 'version': '2022a'}
+toolchain = {'name': 'foss', 'version': '2024a'}
+
+builddependencies = [
+    ('Parallel-Hashmap', '2.0.0'),
+]
 
 dependencies = [
-    ('Python', '3.10.4'),
-    ('PyTorch', local_pytorchver),
-    ('scikit-learn', '1.1.2'),
-    ('scikit-image', '0.19.3'),
-    ('numba', '0.56.4'),
-    ('h5py', '3.7.0'),
-    ('tqdm', '4.64.0'),
-    ('RDFlib', '6.2.0'),
-    ('ASE', '3.22.1'),
+    ('Python', '3.12.3'),
+    ('PyTorch-bundle', '2.6.0'),
+    ('PyTorch-Lightning', '2.5.2'),
+    ('aiohttp', '3.10.10'),
+    ('tqdm', '4.66.5'),
+    ('ASE', '3.23.0'),
+    ('graphviz-python', '0.21'),
+    ('h5py', '3.12.1'),
+    ('numba', '0.60.0'),
+    ('RDFlib', '7.0.0'),
+    ('RDKit', '2025.03.3'),
+    ('scikit-learn', '1.5.2'),
+    ('scikit-image', '0.25.0'),
     ('YACS', '0.1.8'),
 ]
 
 exts_list = [
-    ('googledrivedownloader', '0.4', {
-        'modulename': 'google_drive_downloader',
-        'checksums': ['4b34c1337b2ff3bf2bd7581818efbdcaea7d50ffd484ccf80809688f5ca0e204'],
-    }),
-    ('plyfile', '0.7.4', {
-        'checksums': ['9e9a18d22a3158fcd74df38761d43a7facc6df75126f2ab9f4e9a5d4d2188652'],
-    }),
-    ('torch_scatter', version, {
-        'checksums': ['3a7124c2a033552febbdc72407f7d4d8cb6dce465720e84ab831512e81c1d208'],
-    }),
-    ('torch_sparse', '0.6.15', {
-        'checksums': ['3a741ae8a7cc19247a44de549fa4d593c4257b5f741e1eb5110b712a14209dd9'],
+    ('torch_scatter', '2.1.2', {
+        'source_urls': ['https://github.com/rusty1s/pytorch_scatter/archive/refs/tags/'],
+        'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
+        'checksums': ['6f375dbc9cfe03f330aa29ea553e9c7432e9b040d039b041f08bf05df1a8bf37'],
+        'runtest': 'pytest',
+        'testinstall': True,
     }),
-    ('torch_cluster', '1.6.0', {
-        'checksums': ['249c1bd8c33a887b22bf569a59d0868545804032123594dd8c76ba1885859c39'],
+    ('torch_sparse', '0.6.18', {
+        'source_urls': ['https://github.com/rusty1s/pytorch_sparse/archive/refs/tags/'],
+        'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
+        'checksums': ['a9e194cddc17481001ac4592a058450493ce13780e8ce3eb54d4f79706e69c91'],
+        'runtest': 'pytest -k "not test_spmm[dtype10-device10-sum] and not test_spmm[dtype16-device16-add]"',  # flaky
+        'testinstall': True,
     }),
-    ('torch_spline_conv', '1.2.1', {
-        'checksums': ['364f658e0ecb4c5263a728c2961553e022fc44c11a633d5a1bf986cf169ab438'],
+    ('torch_cluster', '1.6.3', {
+        'source_urls': ['https://github.com/rusty1s/pytorch_cluster/archive/refs/tags/'],
+        'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
+        'checksums': ['0e2b08095e03cf87ce9b23b7a7352236a25d3ed92d92351dc020fd927ea8dbfe'],
+        'runtest': (
+            'pytest'
+            ' -k "not test_nearest[dtype0-device0]" '  # scipy.cluster.vq does not support float16, skip this param
+        ),
+        'testinstall': True,
     }),
-    ('python-louvain', '0.16', {
-        'modulename': 'community.community_louvain',
-        'checksums': ['b7ba2df5002fd28d3ee789a49532baad11fe648e4f2117cf0798e7520a1da56b'],
+    ('torch_spline_conv', '1.2.2', {
+        'source_urls': ['https://github.com/rusty1s/pytorch_spline_conv/archive/refs/tags/'],
+        'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
+        'checksums': ['258947394514ba487b2617268ae7102e9a06fd15d79f5d8239a96211a85adc3d'],
+        'runtest': 'pytest',
+        'testinstall': True,
     }),
     ('torch_geometric', version, {
-        'checksums': ['72653deca925885e4d613eb5c72268bb9710325d9c717516922499fbe1197079'],
+        'source_urls': ['https://github.com/pyg-team/pytorch_geometric/archive/refs/tags/'],
+        'sources': [{'download_filename': '%(version)s.tar.gz', 'filename': '%(name)s-%(version)s.tar.gz'}],
+        'patches': ['PyTorch-Geometric-2.6.1_relax-tolerance-test-message-passing.patch'],
+        'checksums': [
+            {'torch_geometric-2.6.1.tar.gz': 'd0f1ced0bfc66fa187544332b21076d0ceedf4b989276cc220a8a857bdf0ae69'},
+            {'PyTorch-Geometric-2.6.1_relax-tolerance-test-message-passing.patch':
+             '9e3d5b477ee84fb7e1ce67370b195b2a1fe51a65238f37d4db649e47127fead8'},
+        ],
+        'runtest': (
+            'pytest'
+            ' --ignore=test/test_edge_index.py'  # many tests require PyTorch with MKL
+            ' --ignore=test/nn/models/test_graph_unet.py'  # requires PyTorch with MKL
+            ' --ignore=test/nn/pool/test_asap.py'  # requires PyTorch with MKL
+            ' --ignore=test/transforms/test_add_metapaths.py'  # requires PyTorch with MKL
+            ' --ignore=test/transforms/test_two_hop.py'  # requires PyTorch with MKL
+            ' --ignore=test/test_inspector.py'  # test failing due to typing change
+            ' --ignore=test/nn/conv/test_hetero_conv.py'  # unknown jit compilation issue
+            ' --ignore=test/nn/conv/test_sage_conv.py'  # unknown jit compilation issue
+            ' --ignore=test/graphgym/test_graphgym.py'  # torch-lightning can fail on site specific Slurm environment
+            ' -k "'
+            'not test_multithreading_neighbor_loader '  # picky about number of cores in the environment
+            # these tests feed all torch_geometric.datasets into a hydra config store
+            # new datasets in v2.6.1 (OPF) have incompatible types with omegaconf
+            'and not test_fill_config_store and not test_hydra_config_store '
+            '"'
+        ),
+        'testinstall': True,
     }),
 ]

boegel · 2026-01-04T17:18:59Z

@boegelbot please test @ jsc-zen3

boegelbot · 2026-01-04T17:20:09Z

@boegel: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=24947 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_24947 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

exit code: 0
output:

Submitted batch job 9310

Test results coming soon (I hope)...

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Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

boegel

lgtm

boegelbot · 2026-01-04T17:48:57Z

Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (total: 28 mins 25 secs) (1 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.7, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.23
See https://gist.github.com/boegelbot/deb3bbc9bf62be422bf767bb37c72e48 for a full test report.

…asyconfigs into 20251221112206_new_pr_PyTorch-Geometric261

boegel · 2026-01-06T14:55:37Z

Test report by @boegel
FAILED
Build succeeded for 0 out of 3 (total: 1 hour 1 min 51 secs) (1 easyconfigs in total)
node4225.shinx.os - Linux RHEL 9.6, x86_64, AMD EPYC 9654 96-Core Processor (zen4), Python 3.9.21
See https://gist.github.com/boegel/a3f1ee9857411666f76be1cf3256b38b for a full test report.

boegel · 2026-01-06T18:38:29Z

@lexming Any idea why these tests (for torchvision) would be failing for me? 🤔

FAILED test/test_image.py::test_decode_gif[True-earth] - RuntimeError: The following operation failed in the TorchScript interpreter.
FAILED test/test_image.py::test_decode_gif[False-earth] - RuntimeError: DGifOpenFileName() failed - 103

Maybe some caching issue in $HOME/.cache or whatever?

adding easyconfigs: PyTorch-Geometric-2.6.1-foss-2024a.eb and patches…

7d27e8d

…: PyTorch-Geometric-2.6.1_relax-tolerance-test-message-passing.patch

lexming added the update label Dec 21, 2025

github-actions bot added the 2024a issues & PRs related to 2024a common toolchains label Dec 21, 2025

This was referenced Dec 21, 2025

{bio}[foss/2024a] BioEmu v1.2.0 #24948

Open

{geo}[foss/2024a] Anemoi-Framework v2025.06 #24955

Open

boegel added this to the next release (5.2.1?) milestone Jan 4, 2026

boegel approved these changes Jan 4, 2026

View reviewed changes

Merge branch 'develop' of https://github.com/easybuilders/easybuild-e…

721f184

…asyconfigs into 20251221112206_new_pr_PyTorch-Geometric261

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{lib}[foss/2024a] PyTorch-Geometric v2.6.1 #24947

{lib}[foss/2024a] PyTorch-Geometric v2.6.1 #24947

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{lib}[foss/2024a] PyTorch-Geometric v2.6.1 #24947

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Updated software PyTorch-Geometric-2.6.1-foss-2024a.eb

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lexming commented Dec 21, 2025 •

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Updated software `PyTorch-Geometric-2.6.1-foss-2024a.eb`