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[foss/2023a] dependencies for RoseTTAFold-All-Atom#20616

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pavelToman:20240523155905_new_pr_Brotli-python109
Jun 7, 2024
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[foss/2023a] dependencies for RoseTTAFold-All-Atom#20616
boegel merged 2 commits intoeasybuilders:developfrom
pavelToman:20240523155905_new_pr_Brotli-python109

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@pavelToman pavelToman commented May 23, 2024 •
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(created using eb --new-pr)
resolves vscentrum/vsc-software-stack#327

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adding easyconfigs: Brotli-python-1.0.9-GCCcore-12.3.0.eb, CUnit-2.1-…
80b9042 
…3-GCCcore-12.3.0.eb, e3nn-0.3.3-foss-2023a-CUDA-12.1.1.eb, GnuTLS-3.7.8-GCCcore-12.3.0.eb, Jansson-2.14-GCC-12.3.0.eb, jemalloc-5.3.0-GCCcore-12.3.0.eb, LAPACK-3.12.0-GCC-12.3.0.eb, libedit-20191231-GCCcore-12.3.0.eb, libev-4.33-GCC-12.3.0.eb, libgcrypt-1.10.3-GCCcore-12.3.0.eb, libgpg-error-1.48-GCCcore-12.3.0.eb, libidn2-2.3.2-GCCcore-12.3.0.eb, libnsl-2.0.1-GCCcore-12.3.0.eb, libtasn1-4.19.0-GCCcore-12.3.0.eb, libuv-1.48.0-GCCcore-12.3.0.eb, Markdown-3.6-GCCcore-12.3.0.eb, mpmath-1.3.0-GCCcore-12.3.0.eb, nghttp2-1.58.0-GCC-12.3.0.eb, nghttp3-1.3.0-GCCcore-12.3.0.eb, ngtcp2-1.2.0-GCC-12.3.0.eb, p11-kit-0.25.3-GCCcore-12.3.0.eb, PSIPRED-4.02-GCC-12.3.0.eb
@pavelToman pavelToman changed the title {lib}[GCCcore/12.3.0] Brotli-python v1.0.9, CUnit v2.1-3, e3nn v0.3.3, ... w/ CUDA 12.1.1 Dependencies for RoseTTAFold-All-Atom (foss/2023a)(CUDA/12.1.1) May 23, 2024
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pavelToman commented May 23, 2024

@boegelbot please test @ generoso

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boegelbot commented May 23, 2024

@pavelToman: Request for testing this PR well received on login1

PR test command 'EB_PR=20616 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_20616 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 13538

Test results coming soon (I hope)...

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boegelbot commented May 23, 2024

Test report by @boegelbot
SUCCESS
Build succeeded for 22 out of 22 (22 easyconfigs in total)
cns1 - Linux Rocky Linux 8.9, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/f1b03a893fac336624a3f83e75e20610 for a full test report.

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pavelToman commented May 27, 2024

@boegelbot please test @ jsc-zen3

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boegelbot commented May 27, 2024

@pavelToman: Request for testing this PR well received on jsczen3l1.int.jsc-zen3.fz-juelich.de

PR test command 'if [[ develop != 'develop' ]]; then EB_BRANCH=develop ./easybuild_develop.sh 2> /dev/null 1>&2; EB_PREFIX=/home/boegelbot/easybuild/develop source init_env_easybuild_develop.sh; fi; EB_PR=20616 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs EB_BRANCH=develop /opt/software/slurm/bin/sbatch --job-name test_PR_20616 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen3.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 4217

Test results coming soon (I hope)...

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boegelbot commented May 27, 2024

Test report by @boegelbot
SUCCESS
Build succeeded for 26 out of 26 (22 easyconfigs in total)
jsczen3c1.int.jsc-zen3.fz-juelich.de - Linux Rocky Linux 9.4, x86_64, AMD EPYC-Milan Processor (zen3), Python 3.9.18
See https://gist.github.com/boegelbot/97a11a9cd8f0b25302eb4befb66a086b for a full test report.

@pavelToman pavelToman mentioned this pull request Jun 5, 2024
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@boegel boegel added the update label Jun 6, 2024
@boegel boegel added this to the 4.x milestone Jun 6, 2024
@boegel boegel changed the title Dependencies for RoseTTAFold-All-Atom (foss/2023a)(CUDA/12.1.1) [foss/2023a] dependencies for RoseTTAFold-All-Atom Jun 6, 2024
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boegel commented Jun 6, 2024

Test report by @boegel
SUCCESS
Build succeeded for 22 out of 22 (22 easyconfigs in total)
node3120.skitty.os - Linux RHEL 8.8, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz, Python 3.6.8
See https://gist.github.com/boegel/31908ad06c785df1c82186e0992df447 for a full test report.

@boegel boegel modified the milestones: 4.x, release after 4.9.1 Jun 7, 2024
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boegel approved these changes Jun 7, 2024
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lgtm

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boegel commented Jun 7, 2024

Going in, thanks @pavelToman!

@boegel boegel merged commit 5233a74 into easybuilders:develop Jun 7, 2024
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branfosj commented Jun 7, 2024

This introduced a second libidn2 in GCCcore/12.3.0. See #20771 for removing it and updating GnuTLS.

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@pavelToman pavelToman mentioned this pull request Jul 9, 2024
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