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Feat pims multi channels colors#104

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urubens wants to merge 49 commits intocytomine:pimscytomine/Cytomine-Web-UI:pimsfrom Cytomine-ULiege:feat-pims-multi-channels-colorsCytomine-ULiege/Cytomine-Web-UI:feat-pims-multi-channels-colorsCopy head branch name to clipboard

+2,479-434

Commits

Commits on May 13, 2022

• feat: Use webp thumbnails

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• fix: Change tile urls

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• fix: Do not display unavailable image filters

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• fix: annotation drawing with no outline with pims

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• fix: Find vendor from format instead of mime

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• feat: Add new uploaded file status (to be moved to JS client)

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• Fix: tile parameter for inverse colormap, filter and intensities

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• feat: Add tile parameters for z-slice and timepoint

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• feat: Extract thumbnail display into component [REQUIRES JS CLIENT WITH easy-thumb-url feature]

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• fix: Improve thumb/crop URL building when used as background image

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• Support extra parameters for image thumb url

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• Fix thumb url when no extra parameters

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• feat: Show dynamic list of supported formats from backend image servers

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• fix: Update attributes of ImageInstance/AbstractImage:extrinsicChannels -> apparentChannels

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• fix: mess with channels and apparentChannels

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• feat: Add nb of concrete channels and nb of samples in image details

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• fix: slow thumbnail in image selector + improve detection of best image format (webp/jpg) for thumbs

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Commits on May 16, 2022

• Extract image controls shift buttons to a component

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• feat: Add step selector in image controls

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• Simplify image controls buttons

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• refactor: Each image dimension has its own step value in image controls

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• chore: update license year for controls.js

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Commits on May 17, 2022

• Add support for non-standard tile size

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• Clean tile URL building in viewer

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• feat: Allow to have multiple active slices at same time in a viewer. Only works for multiple channels having same (Z,T) coordinates.

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• feat: Disable draw when multiple slices (channels) are displayed

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• feat: Show annotation channel name in current selection if multiple channels are displayed in viewer

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Commits on May 19, 2022

• Merge branch 'uliege-refactor-image-controls' into uliege-feat-pims-multi-channels

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• Speed up fetchSliceInstancesAround for images with many slices

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Commits on May 20, 2022

• refactor: Comment old color manipulation methods

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• refactor: Start rewrite Color Manipulation panel: allow to show/hide & change color of a channel on-the-fly.

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• feat: Color manipulation: adjustable LUT + auto adjust + reset

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• Color manipulation: channel name is clickable (and toggles histogram)

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• fix: histogram background color update

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• Clean histogram chart

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• histogram chart: remove highest value

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• Improve color manipulation adjust/reset button UX

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• color manipulation: disable adjust/reset button in per-channel adjustable LUT

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• Debounce color selector for channel color manipulation

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• feat: Synchronize channel image controls select with merged channels + rename some variables with 'Index' to avoid confusion between objects and ids

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• Re-use max mergeable channels with new color manipulation panel, a little bit still experimental as we should validate this on very large set of channels

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• Fix sorting of channels thanks to the beauty of JS

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• Fix selection of "mergd-channels" in image controls

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• Color manipulation: add settings dropdown with histogram scale param

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• Color manipulation: add setting to choose adjustment of intensities: by min/max or by brightness/contrast

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• Color manipulation: do not show filter selector if there is none

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• Fix watchers for brightness/contrast computation

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• feat: set default max mergeable channels to 36

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• fix: color manipulation panel display when more than one image in a viewer

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