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1. shotgun-sunbeam shotgun-sunbeam Public

   Forked from respiratory-immunology-lab/microbiome-shotgun

   Pipeline for shotgun metagenomics analyses using Sunbeam wrapper scripts and extensions.

2. sbx_kraken2 sbx_kraken2 Public

   Modified sunbeam kraken2 extension

3. sbx_bracken sbx_bracken Public

   Sunbeam extension for Bracken

4. Wrappers Wrappers Public

   Diverse wrapper scripts

5. project-breathingtogether-wheeze project-breathingtogether-wheeze Public

   Breathing Together parents-reported wheeze project

   R

6. nf-mucimmuno nf-mucimmuno Public

   Forked from mucosal-immunology-lab/nf-mucimmuno

   Nextflow