PAMES

Purity Assessment from DNA MEthylation Sites

Citation

Benelli, M., Romagnoli, D., & Demichelis, F. (2018). Tumor purity quantification by clonal DNA methylation signatures. Bioinformatics.

Installation

You can install PAMES v3 (aka PAMES2) from GitHub with:

# install.packages("devtools")
devtools::install_github("cgplab/PAMES")

To install the previous version of PAMES use:

# install.packages("devtools")
devtools::install_github("cgplab/PAMES", ref='v2.7.2')