Skip to content

Commit

Permalink
Commit from GitHub Actions (Build it)
Browse files Browse the repository at this point in the history
  • Loading branch information
gvegayon committed Apr 14, 2024
1 parent 0d64a1e commit aae297e
Showing 1 changed file with 86 additions and 84 deletions.
170 changes: 86 additions & 84 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -9,13 +9,94 @@ document updated once a week or whenever there’s a push or pull request.
It performs a search on PubMed looking for the <a
href="https://pubmed.ncbi.nlm.nih.gov/?term=agent-based+model&amp;sort=date"
target="_blank">latest papers about Agent-Based Models</a>. The last
update was on 2024-04-07 00:39:12.
update was on 2024-04-14 00:39:46.

<div class="cell">

</div>

1. **Dynamics of Information Flow and Task Allocation of Social Insect
1. **AESIS-1, a Rheumatoid Arthritis Therapeutic Peptide, Accelerates
Wound Healing by Promoting Fibroblast Migration in a CXCR2-Dependent
Manner.**

Park SB, Yang Y, Bang SI, Kim TS, Cho D.

Int J Mol Sci. 2024 Apr 1;25(7):3937. doi: 10.3390/ijms25073937.

> In this study, we attempted to use the anti-RA material AESIS-1 as
> a therapeutic wound-healing agent based on disease-modifying
> antirheumatic drugs (DMARDs), which can help restore prompt wound
> healing. The efficacy of AESIS-1 in wound healing was assessed
> using a f …
2. **How Network Structure Shapes Languages: Disentangling the Factors
Driving Variation in Communicative Agents.**

Josserand M, Allassonnière-Tang M, Pellegrino F, Dediu D, de Boer B.

Cogn Sci. 2024 Apr;48(4):e13439. doi: 10.1111/cogs.13439.

> While previous studies have highlighted the role of network
> structure in language change, the specific aspects of network
> structure that shape language variability remain largely unknown.
> To address this gap, we developed a Bayesian agent-based model of
> langu …
3. **Assessing and managing the risk of Aedes mosquito introductions
via the global maritime trade network.**

Willoughby JR, McKenzie BA, Ahn J, Steury TD, Lepzcyk CA, Zohdy S.

PLoS Negl Trop Dis. 2024 Apr 10;18(4):e0012110. doi:
10.1371/journal.pntd.0012110. Online ahead of print.

> We used historical maritime movement data in combination with an
> agent-based model to understand invasion risk in the United States
> Gulf Coast and how the risk of these invasions could be reduced.
> …Additionally, in 2012, 99.2% of the arrivals into target po …
4. **Optimization of periodic treatment strategies for bacterial
biofilms using an agent-based in silico approach.**

Blee JA, Gorochowski TE, Hauert S.

J R Soc Interface. 2024 Apr;21(213):20240078. doi:
10.1098/rsif.2024.0078. Epub 2024 Apr 10.

> Because the dynamics and mechanisms of biofilm growth and the
> formation of persister cells are diverse and are affected by
> environmental conditions, it remains a challenge to design optimal
> periodic dosing regimens. Here, we develop a computational
> agent-based mo …
5. **Measuring the communicative constitution of organization as
network formation.**

Schwing KM, Pitt J.

PLoS One. 2024 Apr 9;19(4):e0300399. doi:
10.1371/journal.pone.0300399. eCollection 2024.

> We propose a set of metrics, based upon the four flows theory of
> the communicative constitution of organizations, to evaluate the
> emergence of organization in a social network. Using an
> agent-based model (ABM), we validate that our metrics chart the
> evolution …
6. **School Nutrition Stakeholders Find Utility in MealSim: An
Agent-Based Model.**

Palmer S, Ciubotariu I, Ofori R, Saenz M, Ellison B, Prescott MP.

J Nutr Educ Behav. 2024 Apr 5:S1499-4046(24)00045-9. doi:
10.1016/j.jneb.2024.02.008. Online ahead of print.

> OBJECTIVE: To obtain feedback from school nutrition stakeholders
> on an agent-based model simulating school lunch to inform model
> refinement and future applications. …Stakeholders also provided
> suggestions for training school nutrition administrators …
7. **Dynamics of Information Flow and Task Allocation of Social Insect
Colonies: Impacts of Spatial Interactions and Task Switching.**

Chen J, Guo X, Charbonneau D, Azizi A, Fewell J, Kang Y.
Expand All @@ -29,7 +110,7 @@ update was on 2024-04-07 00:39:12.
> used agent-based models to explore factors affecting spatial
> heterogeneit …
2. **Potential Impact of a Diagnostic Test for Detecting Prepatent
8. **Potential Impact of a Diagnostic Test for Detecting Prepatent
Guinea Worm Infections in Dogs.**

Smalley H, Keskinocak P, Swann J, Hanna C, Weiss A.
Expand All @@ -42,7 +123,7 @@ update was on 2024-04-07 00:39:12.
> dogs. We adapt an agent-based simulation model for forecasting the
> impact of interventions on guinea worm disease in dogs to exa …
3. **Agent-based models under uncertainty.**
9. **Agent-based models under uncertainty.**

Stepanov V, Ferson S.

Expand All @@ -55,7 +136,7 @@ update was on 2024-04-07 00:39:12.
> epistemic rather than aleatory, that is, when it represents a lack
>
4. **Agent-based modeling of stress anisotropy driven nematic ordering
10. **Agent-based modeling of stress anisotropy driven nematic ordering
in growing biofilms.**

Li C, Nijjer J, Feng L, Zhang Q, Yan J, Zhang S.
Expand All @@ -69,85 +150,6 @@ update was on 2024-04-07 00:39:12.
> single-cell microscopy imaging, to track the three-dimensional
> (3D) mor …
5. **Control of Medical Digital Twins with Artificial Neural
Networks.**

Böttcher L, Fonseca LL, Laubenbacher RC.

bioRxiv \[Preprint\]. 2024 Mar 20:2024.03.18.585589. doi:
10.1101/2024.03.18.585589.

> This poses a challenge to existing model-based control and
> optimization approaches that cannot be readily applied to such
> models. …This work introduces dynamics-informed neural-network
> controllers as an alternative approach to control of medical
> digital twins. As …
6. **Comprehensive Lipidomic Automation Workflow using Large Language
Models.**

Beveridge C, Iyer S, Randolph CE, Muhoberac M, Manchanda P,
Clingenpeel AC, Tichy S, Chopra G.

ArXiv \[Preprint\]. 2024 Mar 22:arXiv:2403.15076v1.

> We also developed an integrated language user interface with large
> language models using artificially intelligent (AI) agents that
> permits users to interact with the CLAW platform using a chatbot
> terminal to perform statistical and bioinformatic analyses. We
> envision CLAW …
7. **Control of Medical Digital Twins with Artificial Neural
Networks.**

Böttcher L, Fonseca LL, Laubenbacher RC.

ArXiv \[Preprint\]. 2024 Mar 18:arXiv:2403.13851v1.

> This poses a challenge to existing model-based control and
> optimization approaches that cannot be readily applied to such
> models. …This work introduces dynamics-informed neural-network
> controllers as an alternative approach to control of medical
> digital twins. As …
8. **Risk-sensitive learning is a winning strategy for leading an urban
invasion.**

Breen AJ, Deffner D.

Elife. 2024 Apr 2;12:RP89315. doi: 10.7554/eLife.89315.

> Confirming this mechanism, agent-based forward simulations of
> reinforcement learning-where we simulate ‘birds’ based on
> empirical estimates of our grackles’ reinforcement
> learning-replicate our sex-difference behavioural data. Finally,
> evolutionary modelling …
9. **Cue-driven microbial cooperation and communication: evolving
quorum sensing with honest signaling.**

Czárán T, Scheuring I, Zachar I, Számadó S.

BMC Biol. 2024 Apr 2;22(1):73. doi: 10.1186/s12915-024-01857-6.

> RESULTS: We investigated the evolutionary dynamics of QS in
> populations of cooperators for whom the QS signal is an inevitable
> side effect of producing the public good itself (cue-based QS).
> Using spatially explicit agent-based lattice simulations of
> QS-aided thresh …
10. **Determinants of successful disease control through voluntary
quarantine dynamics on social networks.**

Shi S, Wang Z, Chen X, Fu F.

ArXiv \[Preprint\]. 2024 Mar 13:arXiv:2307.06297v2.

> To better understand self-motivated health behavior choices under
> these factors, here we incorporate voluntary quarantine into an
> endemic disease model – the susceptible-infected-susceptible (SIS)
> model – and perform comprehensive agent-based simulat …
## Code of Conduct

Please note that the PHS-7045-egga project is released with a
Expand Down

0 comments on commit aae297e

Please sign in to comment.