Merge pull request #173 from SysBioChalmers/feat/yaml-workflow

feat: yaml worflow

.github/workflows/yaml-validation.yml

@@ -0,0 +1,38 @@
+name: YAML validation
+
+on:
+  push:
+    branches: [ devel ]
+  pull_request:
+    branches: [ master, devel ]
+
+jobs:
+  yaml-validation:
+    runs-on: ubuntu-latest
+    steps:
+
+    - name: Checkout
+      uses: actions/checkout@v2
+
+    - name: YAML Lint
+      uses: ibiqlik/[email protected]
+      with:
+        ## File(s) or Directory, separate by space if multiple files or folder are specified
+        file_or_dir: modelFiles/
+        ## Path to custom configuration
+        # config_file: # optional
+        ## Custom configuration (as YAML source)
+        config_data: "{extends: default, rules: {line-length: disable}}"
+        ## Format for parsing output [parsable,standard,colored,auto]
+        # format: # optional, default is colored
+        ## Return non-zero exit code on warnings as well as errors
+        # strict: # optional, default is false
+
+    - name: Install cobrapy
+      run: |
+        sudo pip install pip --upgrade
+        sudo pip install cobra
+
+    - name: Test cobrapy import
+      run: 
+        python -c "import cobra ; cobra.io.load_yaml_model('modelFiles/yml/HumanGEM.yml')"