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85 Open 337 Closed
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Issues list

Many rxns without gene-associated appeared in the model after AI-assisted curation bug
#986 opened Mar 6, 2025 by JHL-452b
1
Mistakes GPR rules beta oxidation - ACAD
#980 opened Feb 17, 2025 by ina999111
2
Fatty acid degradation reactions without GPR rules
#979 opened Feb 17, 2025 by ina999111
Duplicates in beta-oxidation reactions
#978 opened Feb 17, 2025 by ina999111
Incorrect evaluation workflow for essential genes in estimateEssentialGenes bug
#970 opened Feb 7, 2025 by JHL-452b
5
Adding new annotation from ModelSeed enhancement
#968 opened Jan 23, 2025 by JHL-452b
Improve annotation of reactions in models enhancement
#967 opened Jan 23, 2025 by JHL-452b
1 task
GPR rules for specific fatty acid oxidation reactions MAR02121, MAR02122, MAR02123
#966 opened Jan 18, 2025 by manas-kohli
3
Improve annotation of metabolites in models enhancement
#964 opened Jan 14, 2025 by JHL-452b
1 task
GPR curation for Acyl-CoA hydrolysis, Acylglycerides metabolism and Nicotinate and nicotinamide metabolism AI-assisted curation
#890 opened Oct 28, 2024 by JHL-452b
2
GPR curation for Vitamin A/B2/C/D/E metabolism (2) AI-assisted curation
#888 opened Oct 28, 2024 by JHL-452b
2
GPR curation for Vitamin A/B2/C/D/E metabolism (1) AI-assisted curation wip
#887 opened Oct 28, 2024 by JHL-452b
3
update model files enhancement
#881 opened Oct 18, 2024 by edkerk
6 of 8 tasks
1
2
Cytosolic metabolites in mitochondrial non-transport reactions bug
#880 opened Oct 15, 2024 by pranasag
2
GPR curation for Linoleate metabolism, Fatty acid elongation and Beta oxidation of even-chain fatty acids AI-assisted curation wip
#875 opened Sep 29, 2024 by JHL-452b
3
Peptide metabolism reactions are reversible bug
#838 opened Aug 16, 2024 by pranasag
1
10
The newest model of Human-GEM gives 0% Stoichiometric Consistency when running MEMOTE bug
#837 opened Aug 9, 2024 by GuilleDufortFing
8
Accurate and complete representation of mitochondrial intermembrane compartment [i] todo
#824 opened Jun 16, 2024 by IVANDOMENZAIN
@IVANDOMENZAIN
1
Duplicate Palmitoyl-CoA Beta-Oxidation Reactions
#801 opened Dec 28, 2023 by Devlin-Moyer
4 tasks
Duplicate Myristoyl-CoA Beta-Oxidation Reactions
#800 opened Dec 28, 2023 by Devlin-Moyer
3 tasks
Duplicate Lauroyl-CoA Beta-Oxidation Reactions
#799 opened Dec 28, 2023 by Devlin-Moyer
Duplicate Eicosanoyl-CoA Beta-Oxidation Reactions bug
#798 opened Dec 28, 2023 by Devlin-Moyer
Beta-Oxidation of (9E)-Octadecenoyl-CoA
#797 opened Dec 28, 2023 by Devlin-Moyer
5 tasks
Beta-Oxidation of (13Z)-octadecenoyl-CoA
#796 opened Dec 28, 2023 by Devlin-Moyer
7 tasks
1
Beta-Oxidation of (9E)-Tetradecenoyl-CoA
#795 opened Dec 28, 2023 by Devlin-Moyer
5 tasks
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