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@pgleeson the nml_doc was passed and then reloded (which took a lot of memory in the case of the hippocampal network) hence in pyNeuroML nml_doc can be passed to avoid reloading.
I've also replaced passing network with only passing network.id to save RAM,
added option to not copy the network.nml file and plus one seed form lems as it is in the latest pynml.

You might update the example scipts to use the restructured generate_lems_simulation(), but I can do that if you merge this in an other pull request.

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