OHDSIVocabularyReleaseRobot
released this
30 Aug 10:50
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since this release
This guide can provide you more background on how to read the release notes.
What's New
1. Structural changes
- Pack_content table is now available via the Vocabulary-v5.0 GitHub repository through the releases (“assets” section).
- We deliver the SSSOM-compatible metadata for certain relationships (link). The metadata mimics the one we collect during the community contribution process and contains the following information:
- Relationship metadata
- Concept metadata
NB! The structure of basic vocabulary tables (i.e. concept, concept_relationship) is not changed, and the first release of metadata is stored in separate tables.
2. ATC
- ATC has been refreshed to the most recent January 2024 version. This update includes adding 272 new 5th-level codes, 24 new 4th-level codes, and 2 new 3rd-level codes.
- Concepts’ level overview:
- We corrected the names of ATC classes based on the refined assignment of routes of administration.
- Relationships’ level overview:
- We introduced a new source-based approach to derive relationships from existing drug vocabularies and greatly refined the relationships to improve accuracy and comprehensiveness. Our current approach relies on external sources, such as dm+d, GRR, UMLS, VANDF, JMDC, DPD, BDPM, Norway drug bank and other proprietary sources. This extensive library of relationships has been curated semi-automatically to construct relationships between ATC and RxNorm / RxNorm Extension vocabulary. As a result, we’ve created more than 9000 new ATC - RxNorm relationships.
- We constructed new relationships for the ATC codes introduced since the previous release.
- We cleaned up old relationships from ATC to RxNorm drugs and ingredients, resulting in more than 7000 deprecated links.
3. LOINC
- LOINC vocabulary has been updated with its 2.77 Feb 2024 version.
- Relationships’ level overview:
- The LOINC-SNOMED hierarchy has been expanded with more than 230 new ‘Is a’ relationships.
- SNOMED concepts in the Measurement domain mapped to LOINC during the previous release have become standard and their mappings to LOINC have been reverted. LOINC - SNOMED deduplication to be discussed in future Vocabulary WG sessions.
4. SNOMED package
- SNOMED has been updated according to the following versions of its modules:
- 2024-02-01 SNOMED CT International;
- 2024-03-01 SNOMED CT US Edition;
- 2024-04-10 SNOMED CT UK Edition.
- Concepts’ level overview:
- Allergic reactions have been moved to the Condition domain.
- Patient encounters have been moved to the Observation domain.
- Relationships’ level overview:
- SNOMED concepts in the Measurement domain mapped to LOINC during the previous release have become standard and their mappings to LOINC have been reverted. LOINC - SNOMED deduplication to be discussed in future Vocabulary WG sessions.
- Some of the SNOMED concepts were mapped over to their standard counterparts.
- It includes both cases when SNOMED concepts were standard and cases when SNOMED concepts did not have mappings. Currently, these affect the following chapters:
- Vaccine and immunization codes in the procedure domain: 628 concepts
- Units, providers and drugs: 137 concepts
- Geography: 19 concepts
- According to the discussion around the post-coordination of pre-coordinated SNOMED measurements, we do not perform any further post-coordination.
5. MedDRA
- MedDRA has been updated according to the source version 27.0, effective from March 2024.
- Relationships’ level overview:
- The MedDRA-SNOMED / OMOP Extension hierarchy has been expanded.
- A total of 2891 PT concepts and 215 LLTs have been mapped to concepts in standard vocabularies, primarily SNOMED.
- Hierarchy mirroring (bugfix):
- Pre-coordinated MedDRA terms (Measurements) are currently positioned below general SNOMED in affected cases.
6. HCPCS
- HCPCS has been updated according to the July 2024 version.
- Concepts’ level overview:
- We improved the precision of validity dates of reused codes to ensure more accurate cohort building.
- Relationships’ level overview:
- We improved drug mapping (incl. community contribution).
7. CPT4
- CPT4 has been updated according to the 2024AA version of UMLS Metathesaurus.
- Relationships’ level overview:
- Newly added immunization codes 90624 and 90695 have been mapped to Standard concepts in the Drug domain.
- We expanded the CPT4 - SNOMED hierarchy by embedding 1164 CPT4 anesthesia-related codes into the SNOMED hierarchy.
- ‘CPT4 - SNOMED cat’ relationships will continue to contribute to the hierarchy. After extensive testing, we concluded that their exclusion from the hierarchy leaves a large number of standard procedure codes outside the concepts_ancestor.
8. CMS Place of Service
- CMS Place of Service vocabulary has been updated according to the May 2, 2024 version.
- Concepts’ level overview:
- We added a note ‘(Deprecated)’ to the names of the codes deprecated by the source concepts. These codes are maintained as Standard (unless they are mapped).
- Concept ‘27, Inpatient Long-term Care (Deprecated)’ has been deprecated by the source and its concept code was reused. According to our current policy, we do not update the names of the reused codes.
- Relationships’ level overview:
- Concepts ‘02, Telehealth Provided Other than in Patient’s Home’ and ‘10, Telehealth Provided in Patient’s Home’ have been destandardized and mapped to the Standard Telehealth concept in the Visit vocabulary, as well as other concepts, previously mapped to ‘02, Telehealth Provided Other than in Patient’s Home’ and ‘10, Telehealth Provided in Patient’s Home’
9. Visit
- Concepts’ level overview:
- A new OMOP-created concept has been added to the Visit vocabulary: OMOP5556618, Telehealth. This concept is intended to be a standard concept for all Telehealth visits, with CMS Place of Service codes 02 and 10 mapped to it.
10. Read
- Relationships’ level overview:
- More than 700 missing ‘Maps to value’ relationships have been added (bugfix)
11. СDISC
- In partnership with the Critical Path Institute, we introduce the CDISC (Clinical Data Interchange Standards Consortium) - a cornerstone terminology used in SDTM (data model for clinical trial data). We used the 2023_11 version.
- Concepts’ level overview:
- We used NCI-metathesaurus as the source. We included the full list of CDISC values available (29018 distinct concepts).
- In some cases (14 588 concepts) concept codes are represented as a complex construct from a unique source identifier and CDISC code values (where available) separated by ‘-’.
- The vocabulary is enriched with synonyms to facilitate the ETL process.
- All the CDISC concepts are non-standard.
- Relationships‘ level overview:
- Mappings are limited to those that can be either algorithmically derived from NCI-metathesaurus tables for clear 1:1 mappings, or curated manually for pre-selected, prioritized ones.
12. ICD Family
- Overview:
- In this release, we incorporate external mapping sources, such as SNOMED - ICD mappings and UMLS into the ICD Family Common Data Environment.
- ICD10, ICD10CM, ICD9CM, ICD10GM, ICD10CN, CIM10 and KCD7 vocabularies have been updated to take into account new mapping candidates.
- With additional mapping sources integration, we continue mapping harmonization across vocabularies by refactoring groups of concepts and adjusting grouping criteria. Some previously integrated groups have been split to enhance the granularity of mappings.
- ICD10CM:
- Has been updated to the latest version (FY2025), effective from October 01, 2024.
- Relationships’ level overview:
- Existing mappings have been updated following:
- SNOMED update
- Community contribution integration
- Existing mappings have been updated following:
- ICD10:
- Relationships’ level overview:
- Existing mappings have been updated following the SNOMED update.
- Relationships’ level overview:
- ICD9CM:
- Relationships’ level overview:
- Existing mappings have been updated following the:
- SNOMED update
- Community contribution integration
- Existing mappings have been updated following the:
- Relationships’ level overview:
- ICD10GM:
- Relationships’ level overview:
- Existing mappings have been updated following the SNOMED update.
- Relationships’ level overview:
- ICD10CN:
- Relationships’ level overview:
- Existing mappings have been updated following the SNOMED update.
- Relationships’ level overview:
- KCD7:
- Relationships’ level overview:
- Existing mappings have been updated following the SNOMED update.
- Relationships’ level overview:
- CIM10:
- Relationships’ level overview:
- Existing mappings have been updated following the SNOMED update.
- Relationships’ level overview:
13. Community contributions
- PPI:
- Concepts’ level overview:
- Concept class and concept name have been changed for some concepts
- Concepts’ level overview:
- HCPCS
- Relationships’ level overview:
- The mapping of one drug HCPCS code has been improved using the community contribution input.
- Relationships’ level overview:
- ICD10PCS
- Relationships’ level overview:
- Mappings of ten ICD10PCS codes to Standard concepts in the Drug domain have been added.
- Relationships’ level overview:
- ICD10CM
- Relationships’ level overview:
- Mappings have been improved with the help of the community contribution input.
- Relationships’ level overview:
- ICD9CM
- Relationships’ level overview:
- Mappings have been improved with the help of the community contribution input.
- Relationships’ level overview:
14. Community contributions: EDI
- EDI, the Korean Electronic Data Interchange code system was updated as a part of a community contribution initiative/pipeline.
- The vocabulary has been updated to the July 2024 version.
- Source data update was done by Seng Chan You and Yiju Park.
- The resulting content was integrated by the vocabulary team using the stage table transfer approach.
15. CVX
- CVX vocabulary has been updated with its CVX 20240515 version.
- Concepts’ level overview:
- Three new concepts have been added.
16. RxNorm and RxNorm Extension
- The vocabulary has been updated to the May 2024 version.
17. VANDF
- The vocabulary has been updated to the June 2024 version.
18. OMOP Invest Drug
- The vocabulary has been updated to the June 2024 version.
19. VANDF
- The vocabulary has been updated to the June 2024 version.
20. NDC/SPL
- The vocabulary has been updated to the August 2024 version.
21. Co-connect, CIEL, ICD9Proc, OPCS4, UK Biobank
- We have updated mappings for these vocabularies without changing vocabulary versions
22. OMOP Extension
- 13 concepts from different clinical areas (extracorporeal circulation, eye tests and pharmacological tests) have been added.
Domain changes
vocabulary_id | old_domain_id | new_domain_id | count |
---|---|---|---|
CIM10 | Condition | Observation | 7 |
CIM10 | Observation | Condition | 21 |
CIM10 | Procedure | Observation | 20 |
CPT4 | Observation | Measurement | 4 |
CPT4 | Procedure | Measurement | 25 |
CPT4 | Procedure | Observation | 1 |
ICD10 | Condition | Observation | 8 |
ICD10 | Observation | Condition | 22 |
ICD10 | Procedure | Observation | 20 |
ICD10CM | Condition | Measurement | 1 |
ICD10CM | Condition | Observation | 16 |
ICD10CM | Measurement | Condition | 1 |
ICD10CM | Observation | Condition | 63 |
ICD10CM | Observation | Measurement | 2 |
ICD10CM | Observation | Procedure | 4 |
ICD10CM | Procedure | Observation | 8 |
ICD10CN | Condition | Observation | 18 |
ICD10CN | Observation | Condition | 51 |
ICD10CN | Procedure | Observation | 29 |
ICD10GM | Condition | Observation | 9 |
ICD10GM | Observation | Condition | 20 |
ICD10GM | Procedure | Observation | 23 |
ICD9CM | Condition | Measurement | 6 |
ICD9CM | Condition | Observation | 232 |
ICD9CM | Observation | Condition | 18 |
ICD9CM | Procedure | Measurement | 3 |
ICD9CM | Procedure | Observation | 11 |
KCD7 | Condition | Observation | 10 |
KCD7 | Observation | Condition | 28 |
KCD7 | Procedure | Observation | 20 |
LOINC | Measurement | Observation | 1 |
SNOMED | Condition | Measurement | 3 |
SNOMED | Condition | Observation | 64 |
SNOMED | Device | Drug | 8 |
SNOMED | Device | Observation | 20 |
SNOMED | Drug | Device | 5 |
SNOMED | Drug | Observation | 27 |
SNOMED | Measurement | Condition | 3 |
SNOMED | Measurement | Meas Value | 10 |
SNOMED | Measurement | Observation | 9 |
SNOMED | Measurement | Procedure | 7 |
SNOMED | Meas Value | Observation | 1 |
SNOMED | Observation | Condition | 203 |
SNOMED | Observation | Device | 8 |
SNOMED | Observation | Drug | 58 |
SNOMED | Observation | Measurement | 38 |
SNOMED | Observation | Meas Value | 2 |
SNOMED | Observation | Procedure | 34 |
SNOMED | Observation | Relationship | 1 |
SNOMED | Procedure | Measurement | 89 |
SNOMED | Procedure | Observation | 125 |
SNOMED | Provider | Observation | 2 |
Newly added concepts grouped by Vocabulary_id and Domain
vocabulary_id | domain_id | count |
---|---|---|
ATC | Drug | 391 |
CDISC | Condition | 455 |
CDISC | Device | 208 |
CDISC | Geography | 274 |
CDISC | Measurement | 8158 |
CDISC | Observation | 16857 |
CDISC | Procedure | 619 |
CDISC | Provider | 39 |
CDISC | Spec Anatomic Site | 1792 |
CDISC | Unit | 616 |
CMS Place of Service | Visit | 3 |
CPT4 | Drug | 16 |
CPT4 | Measurement | 87 |
CPT4 | Observation | 10 |
CPT4 | Procedure | 169 |
CPT4 | Visit | 1 |
CVX | Drug | 3 |
EDI | Device | 16383 |
EDI | Drug | 38833 |
EDI | Procedure | 69160 |
HCPCS | Device | 52 |
HCPCS | Drug | 60 |
HCPCS | Observation | 3 |
HCPCS | Procedure | 16 |
ICD10CM | Condition | 250 |
ICD10CM | Measurement | 5 |
ICD10CM | Observation | 32 |
ICD10CM | Procedure | 4 |
LOINC | Measurement | 775 |
LOINC | Meas Value | 204 |
LOINC | Note | 60 |
LOINC | Observation | 744 |
LOINC | Procedure | 106 |
MedDRA | Condition | 462 |
MedDRA | Measurement | 98 |
MedDRA | Observation | 23 |
MedDRA | Procedure | 171 |
NDC | Device | 220 |
NDC | Drug | 24641 |
OMOP Extension | Measurement | 5 |
OMOP Extension | Observation | 8 |
OMOP Invest Drug | Drug | 1640 |
RxNorm | Drug | 961 |
RxNorm Extension | Drug | 1620 |
SNOMED | Condition | 2097 |
SNOMED | Device | 94 |
SNOMED | Drug | 338 |
SNOMED | Geography | 2 |
SNOMED | Measurement | 333 |
SNOMED | Meas Value | 63 |
SNOMED | Observation | 892 |
SNOMED | Procedure | 430 |
SNOMED | Provider | 8 |
SNOMED | Spec Anatomic Site | 597 |
SNOMED | Specimen | 3 |
SNOMED | Type Concept | 5 |
SNOMED | Unit | 4 |
SPL | Drug | 33628 |
UCUM | Unit | 7 |
VANDF | Device | 285 |
VANDF | Drug | 471 |
Visit | Visit | 1 |
Standard concept changes
vocabulary_id | old_standard_concept | new_standard_concept | count |
---|---|---|---|
ATC | Classification with mapping | Non-standard with mapping | 78 |
ATC | Classification without mapping | Non-standard with mapping | 7 |
ATC | Classification without mapping | Non-standard without mapping | 2 |
CMS Place of Service | Standard | Non-standard with mapping | 1 |
CPT4 | Standard | Non-standard with mapping | 160 |
HCPCS | Non-standard without mapping | Standard | 5 |
ICD10PCS | Standard | Non-standard with mapping | 10 |
LOINC | Standard | Non-standard with mapping | 11 |
LOINC | Classification without mapping | Non-standard without mapping | 6 |
LOINC | Non-standard without mapping | Classification without mapping | 1 |
MedDRA | Non-standard without mapping | Classification with mapping | 3103 |
MedDRA | Classification with mapping | Non-standard with mapping | 1 |
RxNorm | Standard | Non-standard without mapping | 338 |
RxNorm | Classification without mapping | Non-standard without mapping | 66 |
RxNorm | Standard | Non-standard with mapping | 6 |
SNOMED | Standard | Non-standard with mapping | 1098 |
SNOMED | Standard | Non-standard without mapping | 582 |
SNOMED | Non-standard with mapping | Standard | 166 |
SNOMED | Non-standard without mapping | Standard | 9 |
SPL | Classification without mapping | Non-standard without mapping | 6 |
SPL | Classification without mapping | Non-standard with mapping | 2 |
SPL | Classification with mapping | Non-standard with mapping | 2 |
SPL | Non-standard without mapping | Classification without mapping | 1 |
SPL | Non-standard with mapping | Classification without mapping | 1 |
VANDF | Standard | Non-standard without mapping | 171 |
VANDF | Non-standard without mapping | Standard | 7 |
Newly added concepts and their standard concept status
vocabulary_id | new_standard_concept | count |
---|---|---|
ATC | Non-standard with mapping | 6 |
ATC | Classification without mapping | 40 |
ATC | Classification with mapping | 345 |
CDISC | Non-standard with mapping | 5509 |
CDISC | Non-standard without mapping | 23509 |
CMS Place of Service | Non-standard with mapping | 1 |
CMS Place of Service | Standard | 2 |
CPT4 | Non-standard with mapping | 28 |
CPT4 | Classification without mapping | 42 |
CPT4 | Standard | 213 |
CVX | Non-standard with mapping | 1 |
CVX | Standard | 2 |
EDI | Non-standard without mapping | 317 |
EDI | Non-standard with mapping | 124059 |
HCPCS | Non-standard with mapping | 61 |
HCPCS | Standard | 70 |
ICD10CM | Non-standard with mapping | 291 |
LOINC | Classification without mapping | 274 |
LOINC | Non-standard without mapping | 580 |
LOINC | Standard | 1035 |
MedDRA | Classification without mapping | 1 |
MedDRA | Non-standard without mapping | 753 |
NDC | Standard | 212 |
NDC | Non-standard without mapping | 9754 |
NDC | Non-standard with mapping | 14895 |
OMOP Extension | Standard | 13 |
OMOP Invest Drug | Non-standard with mapping | 1640 |
RxNorm | Non-standard with mapping | 28 |
RxNorm | Non-standard without mapping | 56 |
RxNorm | Classification without mapping | 134 |
RxNorm | Standard | 743 |
RxNorm Extension | Standard | 1620 |
SNOMED | Non-standard with mapping | 137 |
SNOMED | Non-standard without mapping | 371 |
SNOMED | Standard | 4375 |
SPL | Non-standard without mapping | 2 |
SPL | Classification without mapping | 33626 |
UCUM | Standard | 7 |
VANDF | Non-standard without mapping | 90 |
VANDF | Standard | 279 |
VANDF | Non-standard with mapping | 387 |
Visit | Standard | 1 |
Vocabulary | Non-standard without mapping | 1 |
Changes of concept mapping status grouped by target domain
vocabulary_id | Old target Domain/Status | New target Domain/Status | count |
---|---|---|---|
AMIS | Drug | No mapping | 1 |
AMT | Drug | No mapping | 4 |
ATC | Drug | No mapping | 1 |
ATC | New concept | Drug | 351 |
ATC | No mapping | Drug | 47 |
BDPM | Drug | No mapping | 8 |
CAP | Measurement | Meas Value | 5 |
CAP | Observation | No mapping | 2 |
CDISC | New concept | Condition | 224 |
CDISC | New concept | Device | 12 |
CDISC | New concept | Drug | 28 |
CDISC | New concept | Gender | 2 |
CDISC | New concept | Geography | 198 |
CDISC | New concept | Measurement | 900 |
CDISC | New concept | Meas Value | 164 |
CDISC | New concept | Observation | 2321 |
CDISC | New concept | Procedure | 200 |
CDISC | New concept | Provider | 22 |
CDISC | New concept | Race | 28 |
CDISC | New concept | Relationship | 34 |
CDISC | New concept | Route | 80 |
CDISC | New concept | Spec Anatomic Site | 1022 |
CDISC | New concept | Specimen | 6 |
CDISC | New concept | Unit | 268 |
CIEL | Condition | Drug | 1 |
CIEL | Condition | No mapping | 27 |
CIEL | Condition | Observation | 2 |
CIEL | Condition/Drug | Drug | 15 |
CIEL | Condition/Drug/Observation | Drug | 1 |
CIEL | Condition/Drug/Observation | Drug/Observation | 1 |
CIEL | Device/Drug | Drug | 3 |
CIEL | Drug | No mapping | 1 |
CIEL | Measurement | No mapping | 1 |
CIEL | No mapping | Unit | 3 |
CIEL | Observation | Condition | 38 |
CIEL | Observation | Measurement | 1 |
CIEL | Observation | No mapping | 5 |
CIEL | Procedure | Measurement | 6 |
CIEL | Procedure | Observation | 3 |
CIM10 | Condition | Condition/Observation | 1 |
CIM10 | Condition | Observation | 4 |
CIM10 | Condition/Observation | Condition | 1 |
CIM10 | Condition/Observation | Observation | 3 |
CIM10 | Observation | Condition | 20 |
CIM10 | Observation | Condition/Observation | 1 |
CIM10 | Observation/Procedure | Observation | 2 |
CIM10 | Procedure | Observation | 20 |
CMS Place of Service | New concept | Visit | 3 |
CO-CONNECT TWINS | No mapping | Observation | 1 |
CPT4 | New concept | Drug | 16 |
CPT4 | New concept | Measurement | 84 |
CPT4 | New concept | Observation | 8 |
CPT4 | New concept | Procedure | 132 |
CPT4 | New concept | Visit | 1 |
CPT4 | No mapping | Procedure | 1 |
CPT4 | Observation | Measurement | 4 |
CPT4 | Observation/Procedure | Measurement/Procedure | 1 |
CPT4 | Procedure | Condition/Procedure | 1 |
CPT4 | Procedure | Measurement | 32 |
CPT4 | Procedure | Observation | 4 |
CPT4 | Procedure/Visit | Visit | 1 |
CPT4 | Visit | Procedure/Visit | 3 |
CVX | New concept | Drug | 3 |
dm+d | Drug | No mapping | 3 |
EDI | Condition | Procedure | 3 |
EDI | Measurement | Procedure | 6 |
EDI | Meas Value | Procedure | 10 |
EDI | New concept | Device | 16381 |
EDI | New concept | Drug | 38834 |
EDI | New concept | Measurement | 559 |
EDI | New concept | Measurement/Procedure | 30 |
EDI | New concept | Procedure | 68255 |
EDI | No mapping | Condition | 9 |
EDI | No mapping | Device | 19458 |
EDI | No mapping | Drug | 23205 |
EDI | No mapping | Measurement | 1696 |
EDI | No mapping | Measurement/Procedure | 110 |
EDI | No mapping | Observation | 95 |
EDI | No mapping | Procedure | 205389 |
EDI | Observation | Procedure | 15 |
EDI | Spec Anatomic Site | Procedure | 13 |
EDI | Specimen | Procedure | 3 |
GCN_SEQNO | Drug | No mapping | 71 |
Gemscript | Drug | No mapping | 2 |
GPI | Drug | No mapping | 9 |
HCPCS | New concept | Device | 52 |
HCPCS | New concept | Drug | 60 |
HCPCS | New concept | Observation | 2 |
HCPCS | New concept | Procedure | 17 |
HCPCS | No mapping | Observation | 1 |
HCPCS | No mapping | Procedure | 4 |
HCPCS | Observation/Visit | Procedure/Visit | 1 |
HCPCS | Procedure | Measurement | 1 |
HCPCS | Procedure/Visit | Observation/Visit | 3 |
HCPCS | Procedure/Visit | Visit | 3 |
HemOnc | Condition | No mapping | 2 |
ICD10 | Condition | Condition/Measurement | 1 |
ICD10 | Condition | Condition/Observation | 4 |
ICD10 | Condition | Observation | 6 |
ICD10 | Condition/Measurement | Measurement | 4 |
ICD10 | Condition/Observation | Condition | 1 |
ICD10 | Condition/Observation | Observation | 3 |
ICD10 | Measurement | Condition | 2 |
ICD10 | Observation | Condition | 21 |
ICD10 | Observation | Condition/Observation | 1 |
ICD10 | Procedure | Observation | 20 |
ICD10CM | Condition | Condition/Measurement | 6 |
ICD10CM | Condition | Condition/Observation | 2 |
ICD10CM | Condition | Observation | 23 |
ICD10CM | Condition/Measurement | Measurement | 5 |
ICD10CM | Condition/Meas Value | Condition | 7 |
ICD10CM | Condition/Observation | Condition | 19 |
ICD10CM | Condition/Observation | Observation | 4 |
ICD10CM | Measurement | Condition | 4 |
ICD10CM | Measurement | Condition/Observation | 3 |
ICD10CM | Meas Value/Observation | Condition | 1 |
ICD10CM | New concept | Condition | 249 |
ICD10CM | New concept | Condition/Observation | 1 |
ICD10CM | New concept | Measurement | 5 |
ICD10CM | New concept | Observation | 32 |
ICD10CM | New concept | Procedure | 4 |
ICD10CM | No mapping | Condition | 9 |
ICD10CM | No mapping | Observation | 19 |
ICD10CM | Observation | Condition | 59 |
ICD10CM | Observation | Condition/Observation | 4 |
ICD10CM | Observation | Measurement | 2 |
ICD10CM | Observation | Procedure | 4 |
ICD10CM | Observation/Procedure | Observation | 1 |
ICD10CM | Procedure | Observation | 8 |
ICD10CN | Condition | Condition/Observation | 2 |
ICD10CN | Condition | Observation | 11 |
ICD10CN | Condition/Measurement | Measurement | 6 |
ICD10CN | Condition/Observation | Condition | 5 |
ICD10CN | Condition/Observation | Observation | 7 |
ICD10CN | Observation | Condition | 49 |
ICD10CN | Observation | Condition/Observation | 2 |
ICD10CN | Observation/Procedure | Observation | 1 |
ICD10CN | Procedure | Observation | 29 |
ICD10GM | Condition | Observation | 4 |
ICD10GM | Condition/Measurement | Measurement | 10 |
ICD10GM | Condition/Observation | Condition | 1 |
ICD10GM | Condition/Observation | Observation | 5 |
ICD10GM | Observation | Condition | 19 |
ICD10GM | Observation/Procedure | Observation | 2 |
ICD10GM | Procedure | Observation | 23 |
ICD10PCS | Procedure | Drug | 10 |
ICD9CM | Condition | Condition/Measurement | 2 |
ICD9CM | Condition | Condition/Observation | 1 |
ICD9CM | Condition | Measurement | 3 |
ICD9CM | Condition | Observation | 3 |
ICD9CM | Condition/Measurement | Condition | 165 |
ICD9CM | Condition/Measurement | Condition/Observation | 3 |
ICD9CM | Condition/Measurement | Measurement | 2 |
ICD9CM | Condition/Observation | Condition | 11 |
ICD9CM | Condition/Observation | Observation | 228 |
ICD9CM | Condition/Procedure | Condition | 2 |
ICD9CM | Observation | Condition | 17 |
ICD9CM | Observation | Condition/Observation | 1 |
ICD9CM | Procedure | Measurement | 3 |
ICD9CM | Procedure | Observation | 11 |
ICD9Proc | No mapping | Drug | 24 |
ICD9Proc | Procedure | Measurement | 3 |
ICD9Proc | Procedure | No mapping | 2 |
ICD9Proc | Procedure | Observation | 4 |
ICD9ProcCN | Procedure | Measurement | 7 |
ICD9ProcCN | Procedure | No mapping | 44 |
ICD9ProcCN | Procedure | Observation | 9 |
ICDO3 | Condition | No mapping | 3 |
ICDO3 | Observation | No mapping | 2 |
KCD7 | Condition | Condition/Observation | 1 |
KCD7 | Condition | Observation | 4 |
KCD7 | Condition/Observation | Condition | 1 |
KCD7 | Condition/Observation | Observation | 3 |
KCD7 | Observation | Condition | 20 |
KCD7 | Observation | Condition/Observation | 1 |
KCD7 | Observation/Procedure | Observation | 2 |
KCD7 | Procedure | Observation | 20 |
LOINC | New concept | Measurement | 533 |
LOINC | New concept | Meas Value | 204 |
LOINC | New concept | Note | 58 |
LOINC | New concept | Observation | 157 |
LOINC | New concept | Procedure | 83 |
MedDRA | Condition | Condition/Measurement | 53 |
MedDRA | Condition | Condition/Observation | 2 |
MedDRA | Condition | Measurement | 1 |
MedDRA | Condition | No mapping | 1 |
MedDRA | Condition | Observation | 1 |
MedDRA | Condition/Observation | Condition | 4 |
MedDRA | Condition/Procedure | Condition | 1 |
MedDRA | Condition/Procedure | Procedure | 1 |
MedDRA | Measurement | Condition | 4 |
MedDRA | Measurement | Condition/Measurement | 7 |
MedDRA | Measurement | Observation | 5 |
MedDRA | Meas Value | Procedure | 1 |
MedDRA | Meas Value/Procedure | Procedure | 1 |
MedDRA | No mapping | Condition | 1292 |
MedDRA | No mapping | Condition/Measurement | 363 |
MedDRA | No mapping | Condition/Observation | 16 |
MedDRA | No mapping | Condition/Procedure | 16 |
MedDRA | No mapping | Drug/Procedure | 2 |
MedDRA | No mapping | Measurement | 594 |
MedDRA | No mapping | Measurement/Observation | 1 |
MedDRA | No mapping | Measurement/Procedure | 8 |
MedDRA | No mapping | Observation | 193 |
MedDRA | No mapping | Observation/Procedure | 6 |
MedDRA | No mapping | Procedure | 616 |
MedDRA | No mapping | Relationship | 1 |
MedDRA | Observation | Condition | 55 |
MedDRA | Observation | Measurement | 2 |
MedDRA | Observation | Measurement/Observation | 1 |
MedDRA | Observation | Observation/Procedure | 1 |
MedDRA | Observation | Procedure | 3 |
MedDRA | Procedure | Condition | 1 |
MedDRA | Procedure | Measurement | 14 |
MedDRA | Procedure | Observation | 1 |
MedDRA | Spec Anatomic Site | Condition | 1 |
MeSH | Condition | No mapping | 3 |
MeSH | Observation | Condition | 2 |
MeSH | Procedure | Measurement | 5 |
MeSH | Procedure | No mapping | 2 |
MeSH | Procedure | Observation | 1 |
Multum | Drug | No mapping | 3 |
NDC | Drug | No mapping | 205 |
NDC | New concept | Device | 212 |
NDC | New concept | Drug | 14895 |
NDC | No mapping | Drug | 2419 |
NDFRT | Drug | No mapping | 19 |
Nebraska Lexicon | Condition | No mapping | 91 |
Nebraska Lexicon | Condition | Observation | 12 |
Nebraska Lexicon | Device | Drug | 1 |
Nebraska Lexicon | Device | No mapping | 16 |
Nebraska Lexicon | Device/Drug | Drug | 5 |
Nebraska Lexicon | Drug | No mapping | 1 |
Nebraska Lexicon | Drug/Observation | Drug | 2 |
Nebraska Lexicon | Geography | No mapping | 17 |
Nebraska Lexicon | Measurement | Meas Value | 15 |
Nebraska Lexicon | Measurement | No mapping | 23 |
Nebraska Lexicon | Measurement | Procedure | 5 |
Nebraska Lexicon | Meas Value | No mapping | 1 |
Nebraska Lexicon | Observation | Condition | 122 |
Nebraska Lexicon | Observation | Device | 1 |
Nebraska Lexicon | Observation | Measurement | 6 |
Nebraska Lexicon | Observation | No mapping | 429 |
Nebraska Lexicon | Observation | Procedure | 28 |
Nebraska Lexicon | Procedure | Measurement | 121 |
Nebraska Lexicon | Procedure | No mapping | 304 |
Nebraska Lexicon | Procedure | Observation | 91 |
Nebraska Lexicon | Spec Anatomic Site | No mapping | 31 |
OMOP Extension | New concept | Measurement | 5 |
OMOP Extension | New concept | Observation | 8 |
OMOP Invest Drug | New concept | Drug | 1640 |
OMOP Invest Drug | No mapping | Drug | 106 |
OPCS4 | Measurement | Procedure | 1 |
OPCS4 | Observation | Procedure | 2 |
OPCS4 | Procedure | Measurement | 4 |
OPS | Measurement/Procedure | Measurement | 1 |
OPS | Observation | Procedure | 1 |
OPS | Procedure | Measurement | 5 |
OPS | Procedure | No mapping | 113 |
OXMIS | Condition | No mapping | 4 |
OXMIS | Condition | Observation | 1 |
OXMIS | Observation | Condition | 1 |
OXMIS | Observation | No mapping | 3 |
OXMIS | Procedure | Measurement | 9 |
OXMIS | Procedure | No mapping | 3 |
OXMIS | Procedure | Observation | 3 |
PCORNet | Device | No mapping | 2 |
PPI | Observation | Condition | 1 |
Read | Condition | No mapping | 34 |
Read | Condition | Observation | 2 |
Read | Condition/Observation | Observation | 1 |
Read | Measurement | Condition | 5 |
Read | Measurement | No mapping | 9 |
Read | Measurement | Observation | 2 |
Read | Measurement | Procedure | 2 |
Read | Measurement/Observation | Measurement | 2 |
Read | Meas Value | Measurement | 1 |
Read | No mapping | Condition | 2 |
Read | No mapping | Observation | 4 |
Read | Observation | Condition | 30 |
Read | Observation | Measurement | 1 |
Read | Observation | No mapping | 191 |
Read | Observation | Procedure | 10 |
Read | Procedure | Measurement | 48 |
Read | Procedure | No mapping | 120 |
Read | Procedure | Observation | 44 |
Read | Procedure | Observation/Procedure | 1 |
RxNorm | Drug | No mapping | 384 |
RxNorm | New concept | Drug | 771 |
RxNorm Extension | Drug | No mapping | 5 |
RxNorm Extension | New concept | Drug | 1620 |
SNOMED | Condition | No mapping | 146 |
SNOMED | Condition | Observation | 26 |
SNOMED | Condition | Procedure | 1 |
SNOMED | Condition/Measurement | Condition | 2 |
SNOMED | Condition/Measurement | Measurement | 1 |
SNOMED | Condition/Observation | Condition | 38 |
SNOMED | Condition/Observation | Observation | 4 |
SNOMED | Condition/Procedure | Condition | 1 |
SNOMED | Condition/Procedure | Procedure | 8 |
SNOMED | Device | Drug | 9 |
SNOMED | Device | No mapping | 16 |
SNOMED | Device/Drug | Drug | 14 |
SNOMED | Drug | Drug/Procedure | 1 |
SNOMED | Drug | No mapping | 5 |
SNOMED | Drug/Measurement | Measurement | 1 |
SNOMED | Drug/Observation | Drug | 8 |
SNOMED | Drug/Observation | Observation | 4 |
SNOMED | Drug/Procedure | Procedure | 10 |
SNOMED | Measurement | Condition/Measurement | 8 |
SNOMED | Measurement | Measurement/Observation | 1 |
SNOMED | Measurement | Meas Value | 15 |
SNOMED | Measurement | No mapping | 47 |
SNOMED | Measurement | Observation | 10 |
SNOMED | Measurement | Procedure | 5 |
SNOMED | Measurement/Meas Value | Measurement | 4 |
SNOMED | Measurement/Observation | Measurement | 3 |
SNOMED | Measurement/Observation | Observation | 1 |
SNOMED | Measurement/Procedure | Measurement | 1 |
SNOMED | Measurement/Procedure | Procedure | 1 |
SNOMED | Meas Value | Measurement | 1 |
SNOMED | Meas Value | No mapping | 1 |
SNOMED | Meas Value/Observation | Observation | 1 |
SNOMED | New concept | Condition | 2097 |
SNOMED | New concept | Device | 94 |
SNOMED | New concept | Drug | 21 |
SNOMED | New concept | Measurement | 333 |
SNOMED | New concept | Meas Value | 63 |
SNOMED | New concept | Observation | 865 |
SNOMED | New concept | Procedure | 428 |
SNOMED | New concept | Provider | 7 |
SNOMED | New concept | Spec Anatomic Site | 597 |
SNOMED | New concept | Specimen | 3 |
SNOMED | New concept | Unit | 4 |
SNOMED | No mapping | Condition | 128 |
SNOMED | No mapping | Drug | 1442 |
SNOMED | No mapping | Measurement | 8 |
SNOMED | No mapping | Observation | 371 |
SNOMED | No mapping | Procedure | 23 |
SNOMED | No mapping | Route | 4 |
SNOMED | No mapping | Spec Anatomic Site | 2 |
SNOMED | No mapping | Unit | 2 |
SNOMED | Observation | Condition | 199 |
SNOMED | Observation | Device | 1 |
SNOMED | Observation | Drug | 119 |
SNOMED | Observation | Measurement | 39 |
SNOMED | Observation | Meas Value | 2 |
SNOMED | Observation | No mapping | 502 |
SNOMED | Observation | Procedure | 35 |
SNOMED | Observation/Procedure | Observation | 8 |
SNOMED | Procedure | Drug | 2 |
SNOMED | Procedure | Drug/Procedure | 1 |
SNOMED | Procedure | Measurement | 156 |
SNOMED | Procedure | No mapping | 436 |
SNOMED | Procedure | Observation | 179 |
SNOMED | Spec Anatomic Site | No mapping | 30 |
SPL | Drug | No mapping | 7 |
SPL | No mapping | Drug | 2 |
SUS | Procedure | Measurement | 5 |
SUS | Procedure | No mapping | 8 |
SUS | Procedure | Observation | 7 |
UCUM | New concept | Unit | 7 |
UK Biobank | Procedure | Measurement | 1 |
VANDF | Device | No mapping | 171 |
VANDF | Drug | No mapping | 3 |
VANDF | New concept | Device | 279 |
VANDF | New concept | Drug | 387 |
VANDF | No mapping | Device | 7 |
VANDF | No mapping | Drug | 7 |
Visit | New concept | Visit | 1 |
New vocabularies added
vocabulary_id |
---|
CDISC |
New vocabulary dependencies
source vocabulary_id | target vocabulary_id | count |
---|---|---|
CDISC | ABMS | 3 |
CDISC | Gender | 2 |
CDISC | HES Specialty | 1 |
CDISC | LOINC | 67 |
CDISC | Medicare Specialty | 13 |
CDISC | NUCC | 4 |
CDISC | OMOP Extension | 6 |
CDISC | OSM | 17 |
CDISC | Provider | 1 |
CDISC | Race | 28 |
CDISC | RxNorm | 23 |
CDISC | RxNorm Extension | 5 |
CDISC | SNOMED | 5071 |
CDISC | UCUM | 268 |
EDI | LOINC | 1664 |
EDI | RxNorm Extension | 57148 |
ICD9Proc | CVX | 18 |
SNOMED | OSM | 17 |
If you have any questions, please try to find the answers on http://forums.ohdsi.org. If you can't find it, please ask here: http://forums.ohdsi.org/t/vocabulary-release-questions/6650