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Feature/modules#137

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danielabdi-noaa wants to merge 13 commits into
NOAA-GSL:developfrom
danielabdi-noaa:feature/modules
Closed

Feature/modules#137
danielabdi-noaa wants to merge 13 commits into
NOAA-GSL:developfrom
danielabdi-noaa:feature/modules

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@danielabdi-noaa danielabdi-noaa commented Apr 12, 2022

DESCRIPTION OF CHANGES:

Replaces environment files with modules

Removes detect_machine.sh script and forces the user to pass --platform=PLATFORM instead

TESTS CONDUCTED:

Tested only on Hera.

Will not work on macosx because module load does not work there.

DEPENDENCIES:

None

DOCUMENTATION:

None

ISSUE (optional):

None

CONTRIBUTORS (optional):

None

hertneky and others added 13 commits February 19, 2022 16:43
Co-authored-by: Tracy <tracy.hertneky@noaa.gov>
* Create build_singularity_gnu.env

* Create wflow_singularity.env

* Updated regional_workflow pointer: ES fork branch

* Update build_singularity_gnu.env

* Update Externals.cfg

Updated the Regional Workflow repo as the accompanied PR (ufs-community/regional_workflow#686) has been merged into the develop branch.

* Update Externals.cfg

updated regional workflow hash

* Update build_singularity_gnu.env

Co-authored-by: JONG KIM <jong.kim@noaa.gov>
* Remove two old SDFs

* Update hash of ufs-weather-model in Externals.cfg

* Fix to list of SDFs.

* Update Externals.cfg for regional_workflow hash

* Fix UPP hash.
…of regional_workflow (NOAA-GSL#224)

## DESCRIPTION OF CHANGES: 
This removes the old/unused physics suite `FV3_CPT_v0` from the list of suites to build.  It also updates the hash of `regional_workflow` to include PR #[697](ufs-community/regional_workflow#697).

## TESTS CONDUCTED: 
Builds successfully on Hera.  See PR #[697](ufs-community/regional_workflow#697) in the `regional_workflow` repo for WE2E tests conducted.

## DEPENDENCIES:
This must be merged after PR #[697](ufs-community/regional_workflow#697) is merged in the `regional_workflow` repo.
* Remove wcoss_cray

* Remove wcoss_cray from docs

* Update hash of regional_workflow
* Add support on NSSL/Odin

* Add wlfow_odin.env and modify detect_machine.sh

* update comment

* Detect explicitly odin1/odin2
* updated docs

* added git submodule

* fix formatting

* added new submodule commits

* fixed ref links

* finished Intro

* finish Components & Intro edits

* edited Rocoto workflow section of Quickstart

* added minor hpc submodule commits

* Updates to Rocoto Workflow in Quick Start

* add to HPC-stack intro

* submodule updates

* added submodule docs edits

* hpc-stack updates & formatting fixes

* hpc-stack intro edits

* bibtex attempted fix

* add hpc-stack module edits

* update sphinxcontrib version

* add .readthedocs.yaml file

* update .readthedocs.yaml file

* update .readthedocs.yaml file

* update conf.py

* updates .readthedocs.yaml with submodules

* updates .readthedocs.yaml with submodules

* submodule updates

* submodule updates

* minor Intro edits

* minor Intro edits

* minor Intro edits

* submodule updates

* fixed typos in QS

* QS updates

* QS updates

* QS updates

* updates to InputOutput and QS

* fix I/O doc typos

* pull updates to hpc-stack docs

* pull updates to hpc-stack docs

* fix table wrapping

* updates to QS for cloud

* fix QS export statements

* fix QS export statements

* QS edits on bind, config

* add bullet points to notes

* running without rocoto

* add HPC-Stack submodule w/docs

* split QS into container/non-container approaches

* added filepath changes for running in container on Orion, et al.

* edits to overview and container QS

* moved CodeReposAndDirs.rst info to the Introduction & deleted file

* continued edits to SRWAppOverview

* combine overview w/non-container docs

* finish merging non-container guide & SRWOverview, rename/remove files, update FAQ

* minor edits for Intro & QS

* updates to BuildRun doc through 3.8.1

* edits to Build/Run and Components

* remove .gitignore

* fix Ch 3 title, 4 supported platform levels note

* fix typos, add term links

* other minor fixes/suggestions implemented

* updated Intro based on feedback; changed SRW to SRW App throughout

* update comment to Intro citation

* add user-defined vertical levels to future work

* Add instructions for srw_common module load

* fix typo

* update Intro & BuildRunSRW based on Mark's feedback

* minor intro updates

* 1st round of jwolff's edits

* 2nd round of jwolff updates

* update QS intro

* fix minor physics details

* update citation and physics suite name

* add compute node allocation info to QS

* add authoritative hpc-stack docs to Intro

Co-authored-by: gspetro <gillian.s.petro@gmail.com>
* create contributor's guide

* add guidelines for making good PR

* good pull request edits

* 1st Draft of COntributor's Guide

* minor formatting edits

* Add instructions for srw_common module load

* fix module files guidance

* fix typo

* update Intro & BuildRunSRW based on Mark's feedback

* minor intro updates

* add info on documentation requirements

* 1st round of J. Beck's edits

* add textonly issue template + minor typo-type fixes

* minor edits/formatting

* remove pylintrc requirement

* fixed .yaml & other minor

Co-authored-by: gspetro <gillian.s.petro@gmail.com>
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10 participants