Compiling dmUpdate post merge of 2022.03-beta1#979

Merged

thomas-robinson merged 103 commits into

NOAA-GFDL:dmUpdatefrom

ngs333:dmUpdate

Jul 26, 2022

Commits on Dec 6, 2021

Initial commit of the fms_diag_object_container. Includes the underlying

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Dec 7, 2021

Modified diag object iterator to fix casting compilation error on CI system.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Dec 8, 2021

Initial modificationss in response to a review by Tom Robinsom

Miguel Zuniga
authored and
Miguel Zuniga
committed
Experimenting with documentation annotations.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Dec 9, 2021

Added test of fms_diag_object_container class. Further changes to follow convention

Miguel Zuniga
authored and
Miguel Zuniga
committed
Corrected script calling unit test. Added todo in fms_diag_yaml.F90.

Miguel Zuniga
authored and
Miguel Zuniga
committed
Cleaned up test of container.

Miguel Zuniga
authored and
Miguel Zuniga
committed
Addded a "TODO:" to fms_diag_yaml.F90, function is filed type null.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Dec 13, 2021

Modified new files and unit test for further compliance with coding standards

Miguel Zuniga
authored and
Miguel Zuniga
committed
Renamed the linked list mod. Corrected CMakeList.txtx and a Makefile.am.

Miguel Zuniga
authored and
Miguel Zuniga
committed
Renamed linked list mod. Changed a Makefile.am.

Miguel Zuniga
authored and
Miguel Zuniga
committed
Fixed CMakeLists.txt.

Miguel Zuniga
authored and
Miguel Zuniga
committed
Mods to CMakeLIst.txt. Includes adding parser dir files.

Miguel Zuniga
authored and
Miguel Zuniga
committed
Fixing typo in CMakeLists.txt

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Dec 14, 2021

Many comments and documentation chages based on Tom R's 2nd review.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Dec 15, 2021

Adds annotations @addtogroup and @{ to the diag object container mod and the linked list mod.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Dec 16, 2021

Added comments for the "this" variable. Nods to use "!<" for var comments.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Dec 17, 2021

Further doxygen related improvements. Some improvements on on calss access (private/public) lables.

Miguel Zuniga
authored and
Miguel Zuniga
committed
Merge remote-tracking branch 'upstream/dmUpdate' into dmUpdate

Miguel Zuniga
authored and
Miguel Zuniga
committed
Five chages of list node instance declarations from class to node to

Miguel Zuniga
authored and
Miguel Zuniga
committed
One change from type to class for an interator instance. Some comment updates.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Dec 21, 2021

Added test_diag_dlinked_list.F90. Modified memeber data/access in several

Miguel Zuniga
authored and
Miguel Zuniga
committed
Improved or added several comments.

Miguel Zuniga
authored and
Miguel Zuniga
committed
Removed vs code related files.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Dec 22, 2021

Removing extraneous return statement in test_diag_dlinked_list.F90.

Miguel Zuniga
authored and
Miguel Zuniga
committed
Improved test_diag_dlinked_list.F90, both code and comments.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Dec 29, 2021

Merge remote-tracking branch 'upstream/dmUpdate' into dmUpdate

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Jan 3, 2022

Removed duplicate yaml_parser.F90 from CMakeLists.txt.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Jan 4, 2022

Incorporates changes based on Tom R's latest review.

Miguel Zuniga
authored and
Miguel Zuniga
committed
Merge branch 'NOAA-GFDL:dmUpdate' into dmUpdate
ngs333
authored
Merge branch 'dmUpdate' of https://github.com/ngs333/FMS into dmUpdate

Miguel Zuniga
authored and
Miguel Zuniga
committed
Includes some doxygen related changes requested by Ryan M.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Jan 7, 2022

Skipping linked list and the container tests by adding skip arg to calls in

Miguel Zuniga
authored and
Miguel Zuniga
committed
Merge branch 'dmUpdate' of https://github.com/NOAA-GFDL/FMS into dmUpdate

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Jan 13, 2022

Fixes the core dump of test_diag_dlinked_list. Also does some

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Jan 14, 2022

Improved comments, especially destructor and clear function.

Miguel Zuniga
authored and
Miguel Zuniga
committed
Merge branch 'dmUpdate' of https://github.com/NOAA-GFDL/FMS into dmUpdate

Miguel Zuniga
authored and
Miguel Zuniga
committed
Modified diag_manager to the containers initialize routine.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Jan 25, 2022

Post review making sure member vars are private.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Feb 1, 2022

Renamed linked list node member "data" to "data_ptr".

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Feb 11, 2022

Merge branch 'NOAA-GFDL:dmUpdate' into dmUpdate
ngs333
authored

Commits on Feb 17, 2022

Changing script test_diag_manager2.sh to enable testing of linked list class.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Feb 25, 2022

Commits on Mar 1, 2022

Merge branch 'NOAA-GFDL:dmUpdate' into dmUpdate
ngs333
authored

Commits on Mar 2, 2022

Merge branch 'NOAA-GFDL:dmUpdate' into dmUpdate
ngs333
authored

Commits on Mar 8, 2022

Merge branch 'NOAA-GFDL:dmUpdate' into dmUpdate
ngs333
authored

Commits on Mar 14, 2022

Merge branch 'NOAA-GFDL:dmUpdate' into dmUpdate
ngs333
authored

Commits on Mar 16, 2022

Added fms_send_data_statfun_mod files.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Mar 21, 2022

Merge branch 'NOAA-GFDL:dmUpdate' into dmUpdate
ngs333
authored

Commits on Mar 23, 2022

Added 1D and 3D functions to weight the field. Functions can be selected

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Mar 28, 2022

More improvements to fms_send_data_statfun.F90

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Mar 29, 2022

Completed replacement of innermost check with use of function pointer.

Miguel Zuniga
authored and
Miguel Zuniga
committed
COmpleted use of ASSOCIATE construct for buffer and counter.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Apr 12, 2022

Added Fortran if-then construct labels.

Miguel Zuniga
authored and
Miguel Zuniga
committed
Merge remote-tracking branch 'upstream/dmUpdate' into dmUpdate

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Apr 13, 2022

Extracted some send_data_ed functionality into new function

Miguel Zuniga
authored and
Miguel Zuniga
committed
Reducing line lengths below 120 for fms_send_data_statfun.F90

Miguel Zuniga
authored and
Miguel Zuniga
committed
Adding fms_send_data_statfun.F90 to CMakeLists.txt

Miguel Zuniga
authored and
Miguel Zuniga
committed
Fixing typo in CMakeLists.txt

Miguel Zuniga
authored and
Miguel Zuniga
committed
Addiing to use statements of fms_send_data_statfun module.

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on Apr 26, 2022

Merge branch 'NOAA-GFDL:dmUpdate' into dmUpdate
ngs333
authored
First version passing diag_manager unit test 17

Miguel Zuniga
authored and
Miguel Zuniga
committed
Merge branch 'dmUpdate' of https://github.com/ngs333/FMS into dmUpdate

Miguel Zuniga
authored and
Miguel Zuniga
committed

Commits on May 2, 2022

Checking further labels on IF construct.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed

Commits on May 3, 2022

Added more labels to IF constructs.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed

Commits on May 4, 2022

Moved averaging functions to own module and added configuration class

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Fixing CMakeLists.txt. Splitting lines greater than 120 chars.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed

Commits on May 13, 2022

Added more if construct labels.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Splitting code lines so they are at most 120 chars.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed

Commits on May 14, 2022

Changed names in fms_diag_weight_procs, e.g. weigh_field_x to

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Added documentation.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed

Commits on May 17, 2022

Added test new tests for send_data_statfun.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Merge branch 'dmUpdate' of https://github.com/NOAA-GFDL/FMS into dmUpdate

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Adding use of platform mod to diag_weight_procs mod. Correcting

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Fixed alloc in tests_send_data_statfun. Allows make check test to complete passing.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Contains first working version of test_send_data_statfun.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed

Commits on May 19, 2022

Fixing dependency of of send_data_statfun_mod in Makefile.am.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Removing return statement from test program.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Changing type of err message char array to pass compilation by Intel compiler.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed

Commits on Jun 3, 2022

Averaging funcs and their cfg now in one module.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed

Commits on Jun 4, 2022

fixing average_the_filed after moving its config info.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Merge branch 'dmUpdate' of https://github.com/NOAA-GFDL/FMS into dmUpdate

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Fixing two typos.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Re-formatting send_data_statfun.F90 file.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed

Commits on Jun 6, 2022

Both new and older send_data_statfun working. Fixed test numbers/counters

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Removed 1st working version of send_data_statfun_mod; leaving

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Fixing makefile.am.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Removing reference to old module (weight procs).

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Fixing length of err_msg_local.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed

Commits on Jun 10, 2022

Modified interface of check_out_of_bounds and update_bounds functions of

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Merge branch 'NOAA-GFDL:dmUpdate' into dmUpdate
ngs333
authored

Commits on Jun 22, 2022

Merge branch 'dmUpdate' of https://github.com/NOAA-GFDL/FMS into dmUpdate

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Changed interface of averaging functions to accept more arguments in

Miguel R Zuniga
authored and
Miguel R Zuniga
committed

Commits on Jul 6, 2022

Merge branch 'dmUpdate' of https://github.com/NOAA-GFDL/FMS into dmUpdate

Miguel R Zuniga
authored and
Miguel R Zuniga
committed

Commits on Jul 12, 2022

Merge branch 'NOAA-GFDL:dmUpdate' into dmUpdate
ngs333
authored

Commits on Jul 18, 2022

Merge branch 'NOAA-GFDL:dmUpdate' into dmUpdate
ngs333
authored
Merge branch 'dmUpdate' of https://github.com/NOAA-GFDL/FMS into dmUpdate

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Merge branch 'dmUpdate' of https://github.com/ngs333/FMS into dmUpdate

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Compiling post merge of 2022.03-beta1 with dmUpdate. Has fix for DM unit test numbers.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed
Removed VSCode config files.

Miguel R Zuniga
authored and
Miguel R Zuniga
committed

Commits on Jul 26, 2022

Merge remote-tracking branch 'upstream/dmUpdate' into dmUpdate

Miguel R Zuniga
authored and
Miguel R Zuniga
committed