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[develop]: Add Doxygen variable definitions to modules#965

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WenMeng-NOAA merged 109 commits into
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gspetro-NOAA:text/us-28
Jul 8, 2024
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[develop]: Add Doxygen variable definitions to modules#965
WenMeng-NOAA merged 109 commits into
NOAA-EMC:developfrom
gspetro-NOAA:text/us-28

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@gspetro-NOAA gspetro-NOAA commented Jun 6, 2024

This PR updates documentation in the following files:

doc/Doxyfile.in --> Removed extra = and updated file using doxygen -u Doxyfile.in to resolve warnings.
UFS_unified_variables_table.csv - fix typo
BOUND.f
BNDLYR.f
CALDWP.f
CALGUST.f
CALHEL.f
CMASSI.f
CTLBLK.f
FRZLVL2.f
GFIP3.f
GFSPOSTSIG.F
IFI.F
LOOKUP.f
MASKS_mod.f
MISCLN.f
PARA_RANGE.f
READ_xml.f
RHGRD.f
RQSTFLD.f
SET_LVLSXML.f
SOIL_mod.f
TRPAUS.f
UPP_PHYSICS.f
VRBLS2D.f
VRBLS3D.f
VRBLS4D.f
cuparm.f
grib2_module.f
gtg_filter.F90
gtg_indices.F90
gtg_read_config.F90
intio_tags.f
machine.f
params.F
physcons.f
svptbl.f
sorc/ncep_post.fd/wrf_io_flags.f
xml_perl_data.f
ZENSUN.f

This PR largely addresses Issue #392 and warnings that came up in modules after documenting routines for that issue.

Authors: @gspetro-NOAA, @jdkublnick

@gspetro-NOAA gspetro-NOAA marked this pull request as ready for review July 2, 2024 15:22
@FernandoAndrade-NOAA FernandoAndrade-NOAA added the Ready for Review This PR is ready for code review. label Jul 8, 2024
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No changes in RT results on Hera.

@WenMeng-NOAA WenMeng-NOAA added the No Baseline Change No baseline of the UPP regression tests are made. label Jul 8, 2024
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This PR is ready for merging.

@WenMeng-NOAA WenMeng-NOAA merged commit 60d1cbb into NOAA-EMC:develop Jul 8, 2024
FernandoAndrade-NOAA pushed a commit that referenced this pull request Aug 14, 2024
* add CTLBLK html

* add CALMICT htmls

* add CALPBL/CALPBLREGIME htmls

* add CALPW, CALRAD_WCLOUD_newcrtm, and CLDRAD htmls

* add COLLECT and COLLECT_LOC htmls

* update EXCH & FDLVL htmls

* update GFIP3, GPVS, and GRIDSPEC htmls

* update INITPOST* htmls

* update MDL2P, MPI_FIRST, & PMICRPH

* update PROCESS & WRFPOST files

* update xml_perl_data html

* update gh-pages

* update ghp

* update gh-pages w/ content of PR 965

* fix path the 2D-Decomp md file

* rm file w/local path
DavidHuber-NOAA added a commit to DavidHuber-NOAA/UPP that referenced this pull request Sep 9, 2024
* origin/develop:
  Updates to support MPAS applications (RRFS and HFIP) (NOAA-EMC#1029)
  Add 6-hrly max winds at 10m to SFS (NOAA-EMC#1019)
  Update jet.lua (NOAA-EMC#1027)
  Updates to support UPP use with MPAS (NOAA-EMC#1018)
  [develop]: Turn on WARN_AS_ERROR for Doxygen Documentation Builds (NOAA-EMC#1023)
  Sample PR for testing (NOAA-EMC#1007)
  Enable template 4-49 to obtain aerosol ensemble information (NOAA-EMC#1011)
  Relocate gfs/gefs/sfs control files (NOAA-EMC#990)
  update g2tmp on aws to 1.12.0 (NOAA-EMC#996)
  [develop]: Update requirements files (NOAA-EMC#994)
  Bump zipp from 3.17.0 to 3.19.1 in /doc/UserGuide (NOAA-EMC#991)
  remove stack-python load for Gaea build (NOAA-EMC#993)
  Bump certifi from 2024.2.2 to 2024.7.4 in /doc/UserGuide (NOAA-EMC#988)
  [develop]: Add Doxygen variable definitions to modules (NOAA-EMC#965)
  Read bucket either as an integer or float (NOAA-EMC#984)
  Update Orion module file for Rocky 9 upgrade (NOAA-EMC#987)
  UPP bugfixes for inline post and g2tmpl 1.12.0 compatibility (and number concentration updates) (NOAA-EMC#974)
  Sync the RRFS hotfix NOAA-EMC#967 and NOAA-EMC#968. (NOAA-EMC#979)
  Bump urllib3 from 2.2.1 to 2.2.2 in /doc/UserGuide (NOAA-EMC#981)
  Fix for hydrostatic runs - write out Omega and HGT from model output (NOAA-EMC#959)
  Bump requests from 2.31.0 to 2.32.0 in /doc/UserGuide (NOAA-EMC#963)
  Correct rt.sh paths (NOAA-EMC#957)
  Updates to use GRIB2 template 4.9 for QPFFFG and QPFARI variables in RRFS (NOAA-EMC#929)
  Add hourly averaged smoke PM2.5 and dust PM10 (NOAA-EMC#917)
  Update Namelist documentation for all namelist options (NOAA-EMC#940)
  update gtg code revision to v.4.16.3 (NOAA-EMC#954)
  Bump jinja2 from 3.1.3 to 3.1.4 in /doc/UserGuide (NOAA-EMC#953)
  Clean up labeling for 15-min accumulated fields (NOAA-EMC#948)
  Updates to the GSL exp1 ceiling diagnostic (NOAA-EMC#947)
  Additional RT log information (NOAA-EMC#941)
  add cmake load to modulefile/gaea.lua (NOAA-EMC#945)
  RRFS updates (NOAA-EMC#938)
  add module for AWS (NOAA-EMC#934)
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4 participants