Add automated CI testing on Hera #14
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| GDAS_CI_ROOT=/scratch1/NCEPDEV/da/Cory.R.Martin/CI/GDASApp | ||
| GDAS_CI_HOST='hera' | ||
| export GDAS_MODULE_USE=$GDAS_CI_ROOT/repo/modulefiles | ||
| export SLURM_ACCOUNT=da-cpu | ||
| export SALLOC_ACCOUNT=$SLURM_ACCOUNT | ||
| export SBATCH_ACCOUNT=$SLURM_ACCOUNT | ||
| export SLURM_QOS=debug |
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|---|---|---|
| @@ -1,24 +1,65 @@ | ||
| help([[ | ||
| Load environment for running JEDI applications with Intel compilers and MPI. | ||
| ]]) | ||
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| local pkgName = myModuleName() | ||
| local pkgVersion = myModuleVersion() | ||
| local pkgNameVer = myModuleFullName() | ||
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| conflict(pkgName) | ||
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| local jedi_opt = '/scratch1/NCEPDEV/jcsda/jedipara/opt/modules' | ||
| setenv('JEDI_OPT', jedi_opt) | ||
| local jedi_core = pathJoin(jedi_opt, 'modulefiles/core') | ||
| prepend_path("MODULEPATH", jedi_core) | ||
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| prepend_path("MODULEPATH", '/scratch1/NCEPDEV/da/python/opt/modulefiles/stack') | ||
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| load("cmake/3.20.1") | ||
| load("git-lfs/2.11.0") | ||
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| load("jedi-intel/2020.2") | ||
| load("szip/2.1.1") | ||
| load("zlib/1.2.11") | ||
| load("udunits/2.2.28") | ||
| load("gsl_lite/0.37.0") | ||
| load("jedi-impi/2020.2") | ||
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| load("hdf5/1.12.0") | ||
| load("pnetcdf/1.12.1") | ||
| load("netcdf/4.7.4") | ||
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| load("boost-headers/1.68.0") | ||
| load("eigen/3.3.7") | ||
| load("bufr/noaa-emc-11.5.0") | ||
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| load("nccmp/1.8.7.0") | ||
| load("pio/2.5.1-debug") | ||
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| load("ecbuild/ecmwf-3.6.1") | ||
| load("eckit/ecmwf-1.16.0") | ||
| load("fckit/ecmwf-0.9.2") | ||
| load("atlas/ecmwf-0.24.1") | ||
| load("nco/4.9.1") | ||
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| load("pybind11/2.7.0") | ||
| load("json/3.9.1") | ||
| load("json-schema-validator/2.1.0") | ||
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| load("hpc") | ||
| load("miniconda3") | ||
| load("gdasapp") | ||
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| setenv("CC","mpiicc") | ||
| setenv("FC","mpiifort") | ||
| setenv("CXX","mpiicpc") | ||
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| local mpiexec = '/apps/slurm/default/bin/srun' | ||
| local mpinproc = '-n' | ||
| setenv('MPIEXEC_EXEC', mpiexec) | ||
| setenv('MPIEXEC_NPROC', mpinproc) | ||
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| whatis("Name: ".. pkgName) | ||
| whatis("Version: ".. pkgVersion) | ||
| whatis("Category: GDASApp") | ||
| whatis("Description: Load all libraries needed for GDASApp") | ||
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GDASApp