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use ungridded dimensions for stokes drift exchange; update to latest ESCOMP#80

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DeniseWorthen merged 188 commits into
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DeniseWorthen:feature/pstokes
Jan 4, 2023
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use ungridded dimensions for stokes drift exchange; update to latest ESCOMP#80
DeniseWorthen merged 188 commits into
NOAA-EMC:emc/developfrom
DeniseWorthen:feature/pstokes

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@DeniseWorthen
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fvitt and others added 30 commits November 3, 2021 18:50
jedwards4b and others added 22 commits November 23, 2022 10:49
### Description of changes
Make the med_fldList fields a linked list instead of an array.   This avoids a lot of small allocations and memory fragmentation.  

### Specific notes

Contributors other than yourself, if any: Denise 

CMEPS Issues Fixed: ESCOMP#321 

Are changes expected to change answers? bfb

Any User Interface Changes (namelist or namelist defaults changes)?

### Testing performed

Testing performed if application target is CESM:
- [X] (recommended) CIME_DRIVER=nuopc scripts_regression_tests.py
   - machines: cheyenne, intel
   - details (e.g. failed tests):  all pass
- [ ] (recommended) CESM testlist_drv.xml
   - machines and compilers:
   - details (e.g. failed tests):
- [X] (optional) CESM prealpha test 
   - machines and compilers cheyenne, intel 
   - details (e.g. failed tests):  All pass except expected fails of cesm2_3_alpha10c
- [ ] (other) please described in detail
   - machines and compilers
   - details (e.g. failed tests):

Testing performed if application target is UFS-coupled:
- [X] (recommended) UFS-coupled testing
   - description: gnu and intel
   - details (e.g. failed tests):

Testing performed if application target is UFS-HAFS:
- [ ] (recommended) UFS-HAFS testing
   - description:
   - details (e.g. failed tests):

### Hashes used for testing:

- [ ] CESM:
  - repository to check out: https://github.com/ESCOMP/CESM.git
  - branch/hash:
- [ ] UFS-coupled, then umbrella repostiory to check out and associated hash:
  - repository to check out:
  - branch/hash:
- [ ] UFS-HAFS, then umbrella repostiory to check out and associated hash:
  - repository to check out:
  - branch/hash:
update flds_exchange_nems for wave coupling changes
### Description of changes

Changes mapping type for UFS between wave-ice-ocn to be bilinear with nstod fill.
Adds optional wave-ice coupling for UFS. 
Minor trailing whitespace cleanup.

### Testing performed

Testing performed if application target is CESM:
- [ ] (recommended) CIME_DRIVER=nuopc scripts_regression_tests.py
   - machines:
   - details (e.g. failed tests):
- [ ] (recommended) CESM testlist_drv.xml
   - machines and compilers:
   - details (e.g. failed tests):
- [ ] (optional) CESM prealpha test
   - machines and compilers
   - details (e.g. failed tests):
- [ ] (other) please described in detail
   - machines and compilers
   - details (e.g. failed tests):

Testing performed if application target is UFS-coupled:
- [X] (recommended) UFS-coupled testing
   - description: all tests are B4B against current develop branch
   - details (e.g. failed tests):

Testing performed if application target is UFS-HAFS:
- [X] (recommended) UFS-HAFS testing
   - description: all tests are B4B against current develop branch
   - details (e.g. failed tests):

### Hashes used for testing:

- [ ] CESM:
  - repository to check out: https://github.com/ESCOMP/CESM.git
  - branch/hash:
- [x] UFS-coupled, then umbrella repostiory to check out and associated hash:
  - repository to check out: https://github.com/ufs-community/ufs-weather-model
  - branch/hash: [3a8533c](ufs-community/ufs-weather-model@3a8533c)
- [x] UFS-HAFS, then umbrella repostiory to check out and associated hash:
  - repository to check out: https://github.com/ufs-community/ufs-weather-model
  - branch/hash: [3a8533c](ufs-community/ufs-weather-model@3a8533c)
@DeniseWorthen
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@junwang-noaa Testing is complete at UWM. We're ready for review and merge. Thanks.

@DeniseWorthen DeniseWorthen merged commit 7cb0874 into NOAA-EMC:emc/develop Jan 4, 2023
@DeniseWorthen DeniseWorthen deleted the feature/pstokes branch January 10, 2023 13:00
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allow ungridded dimensions for partitioned stokes drift; update CMEPS for latest ESCOMP/master