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Merged
climbfuji merged 22 commits into from
Jul 17, 2023
Merged

Use develop branches for repositories in ufs bundle #30

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0c9c122
update hashes
cmgas Apr 13, 2023
7ac8bcb
Update CMakeLists.txt
cmgas Apr 13, 2023
42d6139
update apr 18
cmgas Apr 18, 2023
beec989
build crtm
cmgas Apr 18, 2023
84e49a8
gitignore update
cmgas Apr 18, 2023
0c6f277
Update CMakeLists.txt
cmgas Apr 19, 2023
f877646
correct branches
cmgas May 4, 2023
675edfc
build with develop branches
cmgas Jun 1, 2023
6d7db8e
3dfgat branches
cmgas Jun 5, 2023
86477d3
develop for oops
cmgas Jun 8, 2023
485e4a0
use develop branches
cmgas Jun 13, 2023
f43c779
modify branch in cmakelist
cmgas Jun 28, 2023
9e4a576
Update README.md
climbfuji Jul 14, 2023
74077d9
Revert to feature/ufs_dom for fv3-jedi
climbfuji Jul 14, 2023
82af153
Update bug fix for libpiof.dylib in README.md
climbfuji Jul 17, 2023
c510b93
Update CMakeLists.txt - use correct eckit version
climbfuji Jul 17, 2023
191d326
Update CMakeLists.txt - use correct fckit version
climbfuji Jul 17, 2023
296bdad
Update CMakeLists.txt - use correct atlas version
climbfuji Jul 17, 2023
9ef55a0
Update CMakeLists.txt - use CRTM v3
climbfuji Jul 17, 2023
243cb40
Merge branch 'feature/use_develop' of https://github.com/jcsda/ufs-bu…
climbfuji Jul 17, 2023
0f1c777
Merge branch 'develop' of https://github.com/jcsda/ufs-bundle into fe…
climbfuji Jul 17, 2023
8348529
Revert soca branch to feature/ufs_dom
climbfuji Jul 17, 2023
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42 changes: 19 additions & 23 deletions CMakeLists.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -37,32 +37,28 @@ endif()

# ECMWF libs
# ----------
option("BUNDLE_SKIP_ECKIT" "Don't build eckit" "ON" ) # Skip eckit build unless user passes -DBUNDLE_SKIP_ECKIT=OFF
option("BUNDLE_SKIP_FCKIT" "Don't build fckit" "ON") # Skip fckit build unless user passes -DBUNDLE_SKIP_FCKIT=OFF
option("BUNDLE_SKIP_ATLAS" "Don't build atlas" "ON") # Skip atlas build unless user passes -DBUNDLE_SKIP_ATLAS=OFF

ecbuild_bundle( PROJECT eckit GIT "https://github.com/ecmwf/eckit.git" TAG 1.20.2 )
ecbuild_bundle( PROJECT fckit GIT "https://github.com/ecmwf/fckit.git" TAG 0.10.0 )
ecbuild_bundle( PROJECT atlas GIT "https://github.com/ecmwf/atlas.git" TAG 0.32.1 )
# ecbuild_bundle( PROJECT eckit GIT "https://github.com/ecmwf/eckit.git" TAG 1.23.0 )
# ecbuild_bundle( PROJECT fckit GIT "https://github.com/ecmwf/fckit.git" TAG 0.10.1 )
# ecbuild_bundle( PROJECT atlas GIT "https://github.com/ecmwf/atlas.git" TAG 0.33.0 )

# External FMS
find_package(FMS 2022.04 REQUIRED COMPONENTS R4 R8)

# Core JEDI repositories
# ----------------------
ecbuild_bundle( PROJECT oops GIT "https://github.com/jcsda-internal/oops.git" TAG 3318acc4b527e49fcc2e2d78549a06fc4ab43dd0 ) # develop on apr 18
ecbuild_bundle( PROJECT vader GIT "https://github.com/jcsda-internal/vader.git" TAG c5e0c1a8d4feeedacfef788f7670511e4db41d5d ) # develop on apr 18
ecbuild_bundle( PROJECT saber GIT "https://github.com/jcsda-internal/saber.git" TAG fc8992d7c6634c384f2f61eb121743ab8ede0d6a ) # develop on apr 18
ecbuild_bundle( PROJECT oops GIT "https://github.com/jcsda-internal/oops.git" BRANCH develop UPDATE )
ecbuild_bundle( PROJECT vader GIT "https://github.com/jcsda-internal/vader.git" BRANCH develop UPDATE )
ecbuild_bundle( PROJECT saber GIT "https://github.com/jcsda-internal/saber.git" BRANCH develop UPDATE )


if(UFS_APP MATCHES "^(ATMAERO)$" OR UFS_APP MATCHES "^(S2S)$" OR UFS_APP MATCHES "^(NG-GODAS)$")
ecbuild_bundle( PROJECT gsw GIT "https://github.com/jcsda-internal/GSW-Fortran.git" TAG 1a02ebaf6f7a4e9f2c2d2dd973fb050e697bcc74 ) # develop on apr 18
ecbuild_bundle( PROJECT gsw GIT "https://github.com/jcsda-internal/GSW-Fortran.git" BRANCH develop UPDATE )
endif()

#ecbuild_bundle( PROJECT crtm GIT "https://github.com/jcsda-internal/crtm.git" TAG v2.4-jedi.2 )
ecbuild_bundle( PROJECT crtm GIT "https://github.com/JCSDA/CRTMv3.git" BRANCH develop UPDATE )

ecbuild_bundle( PROJECT ioda GIT "https://github.com/jcsda-internal/ioda.git" TAG fb651c65332692472ea490d72a85ed6a63e8650f ) # develop on apr 18
ecbuild_bundle( PROJECT ufo GIT "https://github.com/jcsda-internal/ufo.git" TAG 3bb109889ab5a01938d189a243660ac52fc9a39b ) # develop on apr 18
ecbuild_bundle( PROJECT ioda GIT "https://github.com/jcsda-internal/ioda.git" BRANCH develop UPDATE )
ecbuild_bundle( PROJECT ufo GIT "https://github.com/jcsda-internal/ufo.git" BRANCH develop UPDATE )

# Options for building with certain models
# ----------------------------------------
Expand All @@ -76,7 +72,7 @@ set(FV3_FORECAST_MODEL "UFS")

# fv3-jedi linear model
# ---------------------
ecbuild_bundle( PROJECT fv3-jedi-lm GIT "https://github.com/jcsda-internal/fv3-jedi-linearmodel.git" BRANCH feature/ufs_dom ) # updated from develop on nov 22, develop hasn't changed by apr 18
ecbuild_bundle( PROJECT fv3-jedi-lm GIT "https://github.com/jcsda-internal/fv3-jedi-linearmodel.git" BRANCH feature/ufs_dom ) # updated from develop on nov 22, develop hasn't changed by june 13

message(INFO "CMAKE_INSTALL_LIBDIR: ${CMAKE_INSTALL_LIBDIR}")
include_directories(${DEPEND_LIB_ROOT}/${CMAKE_INSTALL_INCLUDEDIR})
Expand Down Expand Up @@ -112,7 +108,7 @@ ExternalProject_Add(ufs-weather-model
CMAKE_ARGS -DCMAKE_INSTALL_LIBDIR=${CMAKE_INSTALL_LIBDIR} -DCMAKE_C_FLAGS=-fPIC -DCMAKE_Fortran_FLAGS=-fPIC -DCMAKE_CXX_FLAGS=-fPIC -DCCPP_SUITES=FV3_GFS_v16,FV3_GFS_v16_coupled,FV3_GFS_v15p2 -DCMAKE_EXE_LINKER_FLAGS=${UFS_CMAKE_EXE_LINKER_FLAGS} -DCMAKE_C_COMPILER=${MPI_C_COMPILER} -DCMAKE_CXX_COMPILER=${MPI_CXX_COMPILER} -DCMAKE_Fortran_COMPILER=${MPI_Fortran_COMPILER} -DJEDI_DRIVER=ON -DCMAKE_PREFIX_PATH=${CMAKE_CURRENT_BINARY_DIR}/gsw ${UFS_CMAKE_BUILD_TYPE_FLAG} -DOPENMP=OFF -DINLINE_POST=OFF -DMULTI_GASES=OFF -DMPI=ON -DAPP=${UFS_APP} -DCMAKE_INSTALL_PREFIX=${DEPEND_LIB_ROOT}
# *DH
INSTALL_COMMAND make install
BUILD_ALWAYS FALSE
BUILD_ALWAYS TRUE
)

if(UFS_APP MATCHES "^(ATMAERO)$" OR UFS_APP MATCHES "^(S2S)$" OR UFS_APP MATCHES "^(NG-GODAS)$")
Expand Down Expand Up @@ -161,15 +157,15 @@ if(UFS_APP MATCHES "^(S2S)$")
# fv3-jedi and associated repositories
# ------------------------------------
ecbuild_bundle( PROJECT femps GIT "https://github.com/jcsda-internal/femps.git" TAG 1.2.0 )
ecbuild_bundle( PROJECT fv3-jedi GIT "https://github.com/jcsda-internal/fv3-jedi.git" BRANCH feature/ufs_dom ) # updated from develop on apr 18
ecbuild_bundle( PROJECT soca GIT "https://github.com/jcsda-internal/soca.git" BRANCH feature/ufs_dom ) # updated from develop on apr 18
ecbuild_bundle( PROJECT fv3-jedi GIT "https://github.com/jcsda-internal/fv3-jedi.git" BRANCH feature/ufs_dom )
ecbuild_bundle( PROJECT soca GIT "https://github.com/jcsda-internal/soca.git" BRANCH feature/ufs_dom )
add_dependencies(soca ufs-weather-model)
elseif(UFS_APP MATCHES "^(NG-GODAS)$")
ecbuild_bundle( PROJECT soca GIT "https://github.com/jcsda-internal/soca.git" BRANCH feature/ufs_dom ) # updated from develop on apr 18
ecbuild_bundle( PROJECT soca GIT "https://github.com/jcsda-internal/soca.git" BRANCH feature/ufs_dom )
add_dependencies(soca ufs-weather-model)
elseif(UFS_APP MATCHES "^(ATM)$" OR UFS_APP MATCHES "^(ATMAERO)$")
ecbuild_bundle( PROJECT femps GIT "https://github.com/jcsda-internal/femps.git" TAG 1.2.0 )
ecbuild_bundle( PROJECT fv3-jedi GIT "https://github.com/jcsda-internal/fv3-jedi.git" BRANCH feature/ufs_dom ) # updated from develop on april 18
ecbuild_bundle( PROJECT fv3-jedi GIT "https://github.com/jcsda-internal/fv3-jedi.git" BRANCH feature/ufs_dom )
else()
message(FATAL_ERROR "ufs-bundle unknown UFS_APP ${UFS_APP}")
endif()
Expand All @@ -188,7 +184,7 @@ find_branch_name(REPO_DIR_NAME ioda)
# When LOCAL_PATH_JEDI_TESTFILES is set to the directory of IODA test files stored
# in a local directory, ioda-data repo will not be cloned
if( NOT DEFINED ENV{LOCAL_PATH_JEDI_TESTFILES} AND NOT DEFINED ${GIT_TAG_FUNC} )
ecbuild_bundle( PROJECT ioda-data GIT "https://github.com/JCSDA-internal/ioda-data.git" TAG 8f092c6f164cd2f9ff803f720b13916fa40b0c08 ) # develop on apr 18
ecbuild_bundle( PROJECT ioda-data GIT "https://github.com/JCSDA-internal/ioda-data.git" BRANCH develop UPDATE )
endif()

# If IODA's current branch is available in ioda-data repo, that branch will be checked out
Expand All @@ -198,7 +194,7 @@ branch_checkout (REPO_DIR_NAME ioda-data
# same procedure for ufo-data
find_branch_name(REPO_DIR_NAME ufo)
if( NOT DEFINED ENV{LOCAL_PATH_JEDI_TESTFILES} AND NOT DEFINED ${GIT_TAG_FUNC} )
ecbuild_bundle( PROJECT ufo-data GIT "https://github.com/JCSDA-internal/ufo-data.git" TAG 1944119defaf82e0591683b29462faadcb1921b6 ) # develop on apr 18
ecbuild_bundle( PROJECT ufo-data GIT "https://github.com/JCSDA-internal/ufo-data.git" BRANCH develop UPDATE )
endif()

# If UFO's current branch is available in ufo-data repo, that branch will be checked out
Expand All @@ -208,7 +204,7 @@ branch_checkout (REPO_DIR_NAME ufo-data
# same procedure for fv3-jedi-data
find_branch_name(REPO_DIR_NAME fv3-jedi)
if( NOT DEFINED ENV{LOCAL_PATH_JEDI_TESTFILES} AND NOT DEFINED ${GIT_TAG_FUNC} )
ecbuild_bundle( PROJECT fv3-jedi-data GIT "https://github.com/JCSDA-internal/fv3-jedi-data.git" BRANCH feature/ufs_dom ) # updated from develop on apr 18
ecbuild_bundle( PROJECT fv3-jedi-data GIT "https://github.com/JCSDA-internal/fv3-jedi-data.git" BRANCH feature/ufs_dom )
endif()

# If fv3-jedi's current branch is available in fv3-jedi-data repo, that branch will be checked out
Expand Down
87 changes: 58 additions & 29 deletions README.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -9,37 +9,40 @@ This bundle requires the following spack-stack modules be loaded (all except `fm
> module li

Currently Loaded Modules:
1) stack-apple-clang/13.1.6 22) esmf/8.4.2 43) ecbuild/3.7.2 64) netcdf-cxx4/4.3.1 85) py-pandas/1.4.0
2) zlib/1.2.13 23) llvm-openmp/16.0.0 44) openjpeg/2.3.1 65) json/3.10.5 86) py-pybind11/2.8.1
3) pigz/2.7 24) fms/2023.01 45) eccodes/2.27.0 66) json-schema-validator/2.1.0 87) py-pycodestyle/2.8.0
4) zstd/1.5.2 25) libjpeg/2.1.0 46) eigen/3.4.0 67) odc/1.4.6 88) py-pyhdf/0.10.4
5) tar/1.34 26) jasper/2.0.32 47) openblas/0.3.19 68) py-attrs/22.2.0 89) libyaml/0.2.5
6) gettext/0.21.1 27) libpng/1.6.37 48) eckit/1.23.0 69) py-pycparser/2.21 90) py-pyyaml/6.0
7) libxcrypt/4.4.33 28) g2/3.4.5 49) fftw/3.3.10 70) py-cffi/1.15.1 91) py-gast/0.5.3
8) sqlite/3.40.1 29) g2tmpl/1.10.2 50) fckit/0.10.1 71) py-findlibs/0.0.2 92) py-beniget/0.4.1
9) python/3.10.8 30) sp/2.3.3 51) fiat/1.1.0 72) py-setuptools/59.4.0 93) py-ply/3.11
10) stack-python/3.10.8 31) ip/3.3.3 52) ectrans/1.2.0 73) py-numpy/1.22.3 94) py-pythran/0.12.2
11) pmix/4.2.3 32) cmake/3.23.1 53) atlas/0.33.0 74) py-eccodes/1.4.2 95) py-scipy/1.9.3
12) openmpi/4.1.5 33) git/2.36.0 54) gsibec/1.1.2 75) py-f90nml/1.4.3 96) py-xarray/2022.3.0
13) stack-openmpi/4.1.5 34) libbacktrace/2020-02-19 55) gsl-lite/0.37.0 76) py-h5py/3.7.0 97) jedi-base-env/1.0.0
14) bacio/2.4.1 35) nccmp/1.9.0.1 56) hdf/4.2.15 77) py-cftime/1.0.3.4 98) gftl/1.10.0
15) curl/8.0.1 36) py-pip/23.0 57) jedi-cmake/1.4.0 78) py-netcdf4/1.5.3 99) gftl-shared/1.5.0
16) pkg-config/0.29.2 37) wget/1.21.3 58) libxt/1.1.5 79) py-bottleneck/1.3.5 100) mapl/2.35.2-esmf-8.4.2
17) hdf5/1.14.0 38) base-env/1.0.0 59) libxmu/1.1.2 80) py-packaging/23.0 101) w3nco/2.4.1
18) netcdf-c/4.9.2 39) boost/1.78.0 60) libxpm/3.5.12 81) py-numexpr/2.8.3 102) nemsio/2.5.2
19) netcdf-fortran/4.6.0 40) bufr/11.7.1 61) libxaw/1.0.13 82) py-six/1.16.0 103) sigio/2.3.2
20) parallel-netcdf/1.12.2 41) git-lfs/3.1.4 62) udunits/2.2.28 83) py-python-dateutil/2.8.2 104) w3emc/2.9.2
21) parallelio/2.5.9 42) crtm/v2.4.1-jedi 63) ncview/2.1.8 84) py-pytz/2022.2.1 105) jedi-ufs-env/unified-dev
```
On a pre-configured platform (including an AWS single-node/parallelcluster instance based on a spack-stack AMI), load the spack-stack modules for `skylab-5.0.0` as described in https://spack-stack.readthedocs.io/en/1.4.0 and https://jointcenterforsatellitedataassimilation-jedi-docs.readthedocs-hosted.com/en/1.8.0.

On a configurable (user) platform, follow the instructions in https://spack-stack.readthedocs.io/en/1.4.0 and https://jointcenterforsatellitedataassimilation-jedi-docs.readthedocs-hosted.com/en/1.8.0 to build the `skylab-env` environment, then run (use the appropriate path, compiler/mpi/python versions for your system):
```
module use /Users/heinzell/prod/spack-stack-v1/envs/skylab-env/install/modulefiles/Core
1) stack-apple-clang/13.1.6 22) esmf/8.4.2 43) eccodes/2.27.0 64) json-schema-validator/2.1.0 85) py-pycodestyle/2.8.0
2) pmix/4.2.3 23) llvm-openmp/16.0.0 44) eigen/3.4.0 65) odc/1.4.6 86) py-pyhdf/0.10.4
3) zlib/1.2.13 24) libjpeg/2.1.0 45) openblas/0.3.19 66) py-attrs/22.2.0 87) libyaml/0.2.5
4) openmpi/4.1.5 25) jasper/2.0.32 46) eckit/1.23.1 67) py-pycparser/2.21 88) py-pyyaml/6.0
5) stack-openmpi/4.1.5 26) libpng/1.6.37 47) fftw/3.3.10 68) py-cffi/1.15.1 89) py-gast/0.5.3
6) pigz/2.7 27) g2/3.4.5 48) fckit/0.10.1 69) py-findlibs/0.0.2 90) py-beniget/0.4.1
7) zstd/1.5.2 28) g2tmpl/1.10.2 49) fiat/1.1.0 70) py-setuptools/59.4.0 91) py-ply/3.11
8) tar/1.34 29) sp/2.3.3 50) ectrans/1.2.0 71) py-numpy/1.22.3 92) py-pythran/0.12.2
9) gettext/0.21.1 30) ip/3.3.3 51) atlas/0.33.0 72) py-eccodes/1.4.2 93) py-scipy/1.9.3
10) libxcrypt/4.4.33 31) cmake/3.23.1 52) gsibec/1.1.2 73) py-f90nml/1.4.3 94) py-xarray/2022.3.0
11) sqlite/3.40.1 32) git/2.36.0 53) gsl-lite/0.37.0 74) py-h5py/3.7.0 95) jedi-base-env/1.0.0
12) python/3.10.8 33) libbacktrace/2020-02-19 54) hdf/4.2.15 75) py-cftime/1.0.3.4 96) gftl/1.8.3
13) stack-python/3.10.8 34) nccmp/1.9.0.1 55) jedi-cmake/1.4.0 76) py-netcdf4/1.5.3 97) gftl-shared/1.5.0
14) bacio/2.4.1 35) py-pip/23.0 56) libxt/1.1.5 77) py-bottleneck/1.3.5 98) yafyaml/0.5.1
15) curl/8.0.1 36) wget/1.21.3 57) libxmu/1.1.2 78) py-packaging/23.0 99) mapl/2.35.2-esmf-8.4.2
16) pkg-config/0.29.2 37) base-env/1.0.0 58) libxpm/3.5.12 79) py-numexpr/2.8.3 100) w3nco/2.4.1
17) hdf5/1.14.0 38) boost/1.78.0 59) libxaw/1.0.13 80) py-six/1.16.0 101) nemsio/2.5.2
18) netcdf-c/4.9.2 39) bufr/12.0.0 60) udunits/2.2.28 81) py-python-dateutil/2.8.2 102) sigio/2.3.2
19) netcdf-fortran/4.6.0 40) git-lfs/3.1.4 61) ncview/2.1.8 82) py-pytz/2022.2.1 103) w3emc/2.9.2
20) parallel-netcdf/1.12.2 41) ecbuild/3.7.2 62) netcdf-cxx4/4.3.1 83) py-pandas/1.4.0 104) jedi-ufs-env/unified-dev
21) parallelio/2.5.9 42) openjpeg/2.3.1 63) json/3.10.5 84) py-pybind11/2.8.1 105) fms@2023.01
```
On a pre-configured platform that has spack-stack-1.4.1 (or 1.4.0) installed, load the spack-stack modules as described in https://spack-stack.readthedocs.io/en/1.4.1 (https://spack-stack.readthedocs.io/en/1.4.0), followed by `module load jedi-ufs-env`. On a configurable (user) platform, follow the instructions in https://spack-stack.readthedocs.io/en/1.4.1 to build the `skylab-dev` or `unified-dev` environment, then run (use the appropriate path, compiler/mpi/python versions for your system):
```
module use /Users/heinzell/prod/spack-stack-v1/envs/unified-dev/install/modulefiles/Core
module load stack-apple-clang/13.1.6
module load stack-openmpi/4.1.5
module load stack-python/3.10.8
module load jedi-ufs-env/skylab-dev
module load jedi-ufs-env/unified-dev
```
Further, for testing of the newest `fms@2023.02-beta1` tag, verify if the platform you are on has this version available and if yes, run
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@shlyaeva shlyaeva Jul 17, 2023

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Does this include the change that soca needed?

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@climbfuji climbfuji Jul 17, 2023

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Yes!

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@climbfuji climbfuji Jul 17, 2023

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@travissluka tested this already (he said)

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@shlyaeva shlyaeva Jul 17, 2023

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🎉 you rock!
we'll test with fv3-jedi too, unless @travissluka you already tested with both soca and fv3-jedi?

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@climbfuji climbfuji Jul 17, 2023

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Well, the tag of fms contains the changes that SOCA needs, but the ufs-weather-model, fv3-jedi-linearmodel and fv3-jedi don't work with that tag ye. See ufs-community/ccpp-physics#90 and https://github.com/JCSDA-internal/fv3-jedi-linearmodel/issues/18 for examples. Also, see NOAA-GFDL/FMS#1284 for bugs in the build system of that tag.

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@shlyaeva shlyaeva Jul 17, 2023

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Got it, so testing https://github.com/JCSDA-internal/fv3-bundle/pull/103 (with updates to jcsda repos) isn't expected to work?

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@climbfuji climbfuji Jul 17, 2023

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At least at the moment, not. Let's see how far we get this week.

```
# Loading fms/2023.02-beta1 replaces the default fms@2023.01
module load fms/2023.02-beta1
```

## Building ufs-bundle
Expand All @@ -55,7 +58,33 @@ ecbuild --build=debug -DUFS_APP=ATMAERO .. 2>&1 | tee log.ecbuild
ecbuild --build=debug -DUFS_APP=NG-GODAS .. 2>&1 | tee log.ecbuild
ecbuild --build=debug -DUFS_APP=S2S .. 2>&1 | tee log.ecbuild
```
When using the native Apple `clang` compiler on macOS with `llvm-openmp` installed via homebrew or spack, it may be necessary to add `-DCMAKE_SHARED_LINKER_FLAGS="$llvm_openmp_ROOT/lib/libomp.dylib"` to the ecbuild command.
When using the native Apple `clang` compiler on macOS with `llvm-openmp` installed via homebrew or spack, it may be necessary to add `-DCMAKE_SHARED_LINKER_FLAGS="${llvm_openmp_ROOT}/lib/libomp.dylib"` to the ecbuild command.

macOS users may also encounter this error during the linker phase:
```
dyld[47628]: dyld[47619]: Library not loaded: 'libpioc.dylib'
Referenced from: '/Users/hLibrary not loaded: 'libpioc.dyleinzell/work/ufs-bundle/20230714ib'
...
```
This error comes from the `pioc` library not being installed correctly (a problem we have raised to the `parallelio` maintainers):
```
> otool -L ${parallelio_ROOT}/lib/libpioc.dylib
/Users/heinzell/prod/spack-stack-1.4.1/envs/unified-env/install/apple-clang/13.1.6/parallelio-2.5.9-r5txd2q/lib/libpioc.dylib:
libpioc.dylib (compatibility version 0.0.0, current version 0.0.0)
/Users/heinzell/prod/spack-stack-1.4.1/envs/unified-env/install/apple-clang/13.1.6/netcdf-c-4.9.2-vrrvi2u/lib/libnetcdf.19.dylib (compatibility version 22.0.0, current version 22.2.0)
/Users/heinzell/prod/spack-stack-1.4.1/envs/unified-env/install/apple-clang/13.1.6/parallel-netcdf-1.12.2-mfx2uut/lib/libpnetcdf.4.dylib (compatibility version 5.0.0, current version 5.2.0)
/Users/heinzell/prod/spack-stack-1.4.1/envs/unified-env/install/apple-clang/13.1.6/openmpi-4.1.5-j7pjg6h/lib/libmpi.40.dylib (compatibility version 71.0.0, current version 71.5.0)
/usr/lib/libSystem.B.dylib (compatibility version 1.0.0, current version 1311.100.3)
```
The first identifier to the library itself must either contain `@rpath/` and the `RPATH` needs to be added correctly, or (easier) it must contain the full path to the library. This can be fixed by running:
```
install_name_tool -id ${parallelio_ROOT}/lib/libpioc.dylib ${parallelio_ROOT}/lib/libpioc.dylib
```
A similar fix may be needed for `libpiof.dylib`, depending the `UFS_APP`:
```
install_name_tool -id ${parallelio_ROOT}/lib/libpiof.dylib ${parallelio_ROOT}/lib/libpiof.dylib
install_name_tool -change libpioc.dylib ${parallelio_ROOT}/lib/libpioc.dylib ${parallelio_ROOT}/lib/libpiof.dylib
```

While building with soca (NG-GODAS or S2S), there will be a long pause during configuration when `ecbuild` is downloading the input files for the test to be run.

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