Update for decoupled filter and simulated variables#33
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…evelop_20220705 * Bump release number (#8) * Added a copy of aircraft_obs_2018041500_m.nc4 with air_temperature renamed to renamed_air_temperature. (#9) * Added two single ob files (#11) * Add files with bias correction related data (#13) * Add new ghcn snow depth data for using totalSnowDepth as obs name. (#15) * Initial checking for RRFS configuration and sample files * test aircraft data used with RRFS background * substitute full RAP domain at 13km to CONUS-only 25km * needed file renaming to include tile1 * oh well, sfc_data file should not have tile in the name, ugh * Remove unused observation files from fv3-jedi-data (#20) * Remove unused observation files from fv3-jedi-data * restore file sst * Restore more files * Update the letkf_snow test case - data files. (#17) * testing git-lfs. * Changed background files from 12 to 18 UTC. * Copy of (corrupted) feature/snowOI_test branch * update ghcnd snow obs for test * remove old ghcnd obs Co-authored-by: Andrew Fox <afox@cheyenne4.cheyenne.ucar.edu> Co-authored-by: Andrew Fox <afox@cheyenne6.cheyenne.ucar.edu> Co-authored-by: amfox37 <amfox37@gmail.com> Co-authored-by: Francois Hebert <hebert@ucar.edu> * AERONET AOD and AAOD obs (#21) * add aeronet obs * rename * rename * add aaod obs * reverse add aaod to this branch * aaod * fix aaod * fix errors Co-authored-by: Anna Shlyaeva <annash@ucar.edu> * Feature/avkvcoord (#22) * update input data for tropomi_no2 test (lam_cmaq) * update testinput data for tropomi no2 * add geos cf bkg C12 file (#29) * Switch to 127 levels in gfs model (#26) * Part of the obs files needed * Remove unused observation files from fv3-jedi-data * Remove 2018 files * restore file sst * New files gfs * Add gnssro data * Add geos crtm files * Remove 2018 files geos c12 * oConverted c12 geos ensemble files * rename files * Update files to inclue ql * Re add missing files * Re add aero obs files * remove files, i am not sure why i put them back * Rename files * Remove big aircraft file * Add Dan's obs files * Update gfs member files to include all variables * Rename file error * Put back geos aod obs file * Add all variables to ens members * Add amsr2 file * Remove useless files and update gitignore * Update the GSI static B coefficient file (#30) * add Teppei's more recent file * sync coeff file with saber * rename file to 127 levels * update levels in gsi b file to 127 Co-authored-by: danholdaway <danholdaway@users.noreply.github.com> * Feature/ufs history io (#28) * Add C12 cubed sphere history file for unit tests * Update gfs history file * Adding viirs_bias.nc file for aerosol bias correction DA. (#31) * data for GEOS-CF 3D Var tests (#32) * add geoscf bkg files * add tropomi no2 file * update testintput files for geos hofx * add stddev file for geos cf static b * add stdev file but one should be removed after cleaning * stddev file for geos-cf test * update stddev file * update stddev test again * update tropomi data * fix obs file * update obs input to what it was * Reformatted VIIRS AOD variables into 2D (nlocs X nchans) for V2 compatibility. (#33) * Use lowercase names in all GEOS files (#34) Co-authored-by: danholdaway <danholdaway@users.noreply.github.com> * sss obs added (#37) * sss addesd to sfc_data bkg files (#35) * Bump version in CMakeLists.txt to 1.2.0 (#38) Co-authored-by: Mark Miesch <miesch@ucar.edu> Co-authored-by: Wojciech Śmigaj <wojciech.smigaj@metoffice.gov.uk> Co-authored-by: frolovsa <55715838+frolovsa@users.noreply.github.com> Co-authored-by: Anna Shlyaeva <shlyaeva@gmail.com> Co-authored-by: Jiarui Dong <Jiarui.Dong@noaa.gov> Co-authored-by: gthompsnJCSDA <gthompsn@ucar.edu> Co-authored-by: Clementine Gas <43183478+cmgas@users.noreply.github.com> Co-authored-by: Francois Hebert <hebert@ucar.edu> Co-authored-by: ClaraDraper-NOAA <33430543+ClaraDraper-NOAA@users.noreply.github.com> Co-authored-by: Andrew Fox <afox@cheyenne4.cheyenne.ucar.edu> Co-authored-by: Andrew Fox <afox@cheyenne6.cheyenne.ucar.edu> Co-authored-by: amfox37 <amfox37@gmail.com> Co-authored-by: Mariusz Pagowski <mariusz.pagowski@noaa.gov> Co-authored-by: Anna Shlyaeva <annash@ucar.edu> Co-authored-by: Jérôme Barré <barre@ucar.edu> Co-authored-by: Dan Holdaway <27729500+danholdaway@users.noreply.github.com> Co-authored-by: danholdaway <danholdaway@users.noreply.github.com> Co-authored-by: Cory Martin <cory.r.martin@noaa.gov> Co-authored-by: andytangborn <71304161+andytangborn@users.noreply.github.com> Co-authored-by: Stephen Herbener <32968781+srherbener@users.noreply.github.com> Co-authored-by: HamidehGMAO <40796921+HamidehGMAO@users.noreply.github.com>
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Description
Update that goes with:
https://github.com/JCSDA-internal/fv3-jedi/pull/458
https://github.com/JCSDA-internal/oops/pull/1660
https://github.com/JCSDA-internal/ioda/pull/603
https://github.com/JCSDA-internal/ufo/pull/1896